Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Predicted HD superfamily hydrolase

Gene

mes0020

Organism
uncultured Thermotogales bacterium
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi36 – 361Iron 1; via tele nitrogenCombined sources
Metal bindingi65 – 651Iron 1; via tele nitrogenCombined sources
Metal bindingi66 – 661Iron 1Combined sources
Metal bindingi66 – 661Iron 2Combined sources
Metal bindingi79 – 791Iron 2; via tele nitrogenCombined sources
Metal bindingi111 – 1111Iron 2; via tele nitrogenCombined sources
Metal bindingi131 – 1311Iron 1Combined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Ligandi

IronCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted HD superfamily hydrolaseImported
Gene namesi
ORF Names:mes0020Imported
Organismiuncultured Thermotogales bacteriumImported
Taxonomic identifieri221214 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesenvironmental samples

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PQ7X-ray1.45A1-219[»]
ProteinModelPortaliQ1EM40.
SMRiQ1EM40. Positions 1-217.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ1EM40.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 145117HDcInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1EM40-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLTELMERI PHLREILNIV REAFKDYDDP AHDISHTFRV MENASEIASR
60 70 80 90 100
EKCDLQKAII AALLHDIKRP HEALTGVDHA ESGAEYASGL LPTMGFDISF
110 120 130 140 150
VAEVSKAIRS HRYSGGLTPT SLTGKILQDA DRLDAIGAVA IARVFSYSGK
160 170 180 190 200
TGTPLHSLQF SPRSSYSGNS RSSINHFHEK ILKIRPETFW TETARKMAED
210
RYSFVVEFVQ RFLAEWGQI
Length:219
Mass (Da):24,635
Last modified:July 11, 2006 - v1
Checksum:i9EF7D3D070B68F64
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM184115 Genomic DNA. Translation: CAJ75704.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM184115 Genomic DNA. Translation: CAJ75704.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PQ7X-ray1.45A1-219[»]
ProteinModelPortaliQ1EM40.
SMRiQ1EM40. Positions 1-217.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ1EM40.

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Evidence for existence of "mesotogas," members of the order Thermotogales adapted to low-temperature environments."
    Nesbo C.L., Dlutek M., Zhaxybayeva O., Doolittle F.W.
    Appl. Environ. Microbiol. 72:5061-5068(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (MAY-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS) IN COMPLEX WITH IRON.

Entry informationi

Entry nameiQ1EM40_9BACT
AccessioniPrimary (citable) accession number: Q1EM40
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: March 16, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.