Q1ED07 (Q1ED07_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Atoh1a protein EMBL AAI17599.1

Gene names

Name:

atoh1a ZFIN ZDB-GENE-990415-17

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI17599.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	292 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 basic helix-loop-helix (bHLH) domain. RuleBase RU000367

Ontologies

Gene Ontology (GO)
Biological process	auditory receptor cell fate determination Inferred from mutant phenotype. Source: ZFIN neuromast hair cell development Inferred from mutant phenotype. Source: ZFIN posterior lateral line neuromast hair cell differentiation Inferred from mutant phenotype. Source: ZFIN
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1ED07 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 7703A334FE41BF2B	FASTA	292	31,892
	10 20 30 40 50 60 MDGMSTDTRE VVELDVQHPS LGRGEQSEYP PALALMASSD PRAWLAPVQA GTCAAHAEYL 70 80 90 100 110 120 LHSPGSSAEG VSSASNFRKS SKGPVKVREL CRLKGAVGAD EGRQRAPSSK STNVVQKQRR 130 140 150 160 170 180 MAANARERRR MHGLNHAFDE LRSVIPAFDN DKKLSKYETL QMAQIYINAL SDLLQGPGAK 190 200 210 220 230 240 ADPPNCDLLH ANVLETDRSP RGSPGVCRRG TGVGYPYQYE DGTFNSFMEQ DLQSPSGTSK 250 260 270 280 290 SGSEASKDSP RSNRSDGEFS PHSHFSDSDE THLELQSEDE LSELKLAKRR AF

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Larvae EMBL AAI17599.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC117598 mRNA. Translation: AAI17599.1.
IPI	IPI00495284.
UniGene	Dr.566.
3D structure databases
ProteinModelPortal	Q1ED07.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-990415-17. atoh1a.
Phylogenomic databases
GeneTree	ENSGT00550000074162.
HOVERGEN	HBG050609.
InParanoid	Q1ED07.
Gene expression databases
ArrayExpress	Q1ED07.
Bgee	Q1ED07.
Family and domain databases
InterPro	IPR011598. HLH_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.280.10. HLH_DNA_bd. 1 hit.
Pfam	PF00010. HLH. 1 hit. [Graphical view]
SMART	SM00353. HLH. 1 hit. [Graphical view]
SUPFAM	SSF47459. HLH_basic. 1 hit.
PROSITE	PS50888. HLH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1ED07_DANRE

Accession

Primary (citable) accession number: Q1ED07

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)