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Q1ECX3

- Q1ECX3_DANRE

UniProt

Q1ECX3 - Q1ECX3_DANRE

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Protein
Submitted name:

Tgm2b protein

Gene

tgm2b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

Cofactori

Note: Binds 1 calcium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei268 – 2681UniRule annotation
Active sitei327 – 3271UniRule annotation
Active sitei350 – 3501UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Tgm2b proteinImported
Gene namesi
Name:tgm2bImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-030131-2576. tgm2b.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000099554.

Structurei

3D structure databases

ProteinModelPortaliQ1ECX3.
SMRiQ1ECX3. Positions 14-678.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG80379.
HOGENOMiHOG000231695.
HOVERGENiHBG004342.
KOiK05625.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1ECX3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALDIGSWDL ACKFNNTDHH TELNGTDRLI VRRGQAFTIN LQLNSGSYQP
60 70 80 90 100
GYSQINITAE TGPDPQQQYG TRAVFSLSSE VDSSCWSAAV SSPPGESVCL
110 120 130 140 150
SICAAPDAPI GHYTLTLDER IQIQFILLFN PWCPLDVVYM DNEEKLAEYV
160 170 180 190 200
LAQDGIIFRG DAGYPVPLAW NFGQFEEGIL DACFRILDMN PKHRRNPAKD
210 220 230 240 250
CSGRRNVIYV TRVLSAMINS NDQDSGVLEG CWRDTFDGGV SPMSWGGSVQ
260 270 280 290 300
ILRTWDRSSC LPVRYGQCWV FAAVACTVAR AVGIPCRVVT NYYSAHDTNS
310 320 330 340 350
NLLIERYVNE KGEVDHSSTR DMIWNYHCWV ESWMGRSDLP PGFDGWQASD
360 370 380 390 400
PTPQEKSEGV FCCGPVPVRA IKEGELTFKY DAPFVFAEVN ADLVYFLKSK
410 420 430 440 450
DGSTRKINYD QKVGQKISTK SVGRDEREDI THLYKYPEGS ADERRVFEKA
460 470 480 490 500
NHQNKLLQEK QNTGLNITIK LSSGVRKGCD FDVFAIVTNG TAEEKKCRLV
510 520 530 540 550
FASRAVSYNG VIGRECGFKD LLNVELPPGG ERKVPLRLNY SKYCNNLTED
560 570 580 590 600
NLIRLGALLI DYSTRDAIMA MRDIVLDDPE IKIRILGEPK ENRKLAAELT
610 620 630 640 650
IQNPLPEALQ SCCFTIEGAN LTGGDSITHT LDSSIEPGQE AKAKIYFTPT
660 670
QSGLRKLLVD FNSDKLGHVR GYRNVIIGK
Length:679
Mass (Da):75,773
Last modified:July 11, 2006 - v1
Checksum:iCA43F4888970F033
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC117635 mRNA. Translation: AAI17636.1.
RefSeqiNP_997821.2. NM_212656.2.
UniGeneiDr.16524.

Genome annotation databases

GeneIDi323856.
KEGGidre:323856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC117635 mRNA. Translation: AAI17636.1 .
RefSeqi NP_997821.2. NM_212656.2.
UniGenei Dr.16524.

3D structure databases

ProteinModelPortali Q1ECX3.
SMRi Q1ECX3. Positions 14-678.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000099554.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 323856.
KEGGi dre:323856.

Organism-specific databases

CTDi 323856.
ZFINi ZDB-GENE-030131-2576. tgm2b.

Phylogenomic databases

eggNOGi NOG80379.
HOGENOMi HOG000231695.
HOVERGENi HBG004342.
KOi K05625.

Miscellaneous databases

NextBioi 20808462.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: WholeImported.

Entry informationi

Entry nameiQ1ECX3_DANRE
AccessioniPrimary (citable) accession number: Q1ECX3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: November 26, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)