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Q1ECX3

- Q1ECX3_DANRE

UniProt

Q1ECX3 - Q1ECX3_DANRE

Protein
Submitted name:

Tgm2b protein

Gene

tgm2b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei268 – 2681UniRule annotation
    Active sitei268 – 2681 By similarity
    Active sitei327 – 3271UniRule annotation
    Active sitei327 – 3271 By similarity
    Active sitei350 – 3501UniRule annotation
    Metal bindingi390 – 3901Calcium
    Metal bindingi392 – 3921Calcium
    Metal bindingi438 – 4381Calcium
    Metal bindingi443 – 4431Calcium

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. peptide cross-linking Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Tgm2b proteinImported
    Gene namesi
    Name:tgm2bImported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

    Organism-specific databases

    ZFINiZDB-GENE-030131-2576. tgm2b.

    Interactioni

    Protein-protein interaction databases

    STRINGi7955.ENSDARP00000099554.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1ECX3.
    SMRiQ1ECX3. Positions 14-678.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG80379.
    HOGENOMiHOG000231695.
    HOVERGENiHBG004342.
    InParanoidiQ1ECX3.
    KOiK05625.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1ECX3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALDIGSWDL ACKFNNTDHH TELNGTDRLI VRRGQAFTIN LQLNSGSYQP    50
    GYSQINITAE TGPDPQQQYG TRAVFSLSSE VDSSCWSAAV SSPPGESVCL 100
    SICAAPDAPI GHYTLTLDER IQIQFILLFN PWCPLDVVYM DNEEKLAEYV 150
    LAQDGIIFRG DAGYPVPLAW NFGQFEEGIL DACFRILDMN PKHRRNPAKD 200
    CSGRRNVIYV TRVLSAMINS NDQDSGVLEG CWRDTFDGGV SPMSWGGSVQ 250
    ILRTWDRSSC LPVRYGQCWV FAAVACTVAR AVGIPCRVVT NYYSAHDTNS 300
    NLLIERYVNE KGEVDHSSTR DMIWNYHCWV ESWMGRSDLP PGFDGWQASD 350
    PTPQEKSEGV FCCGPVPVRA IKEGELTFKY DAPFVFAEVN ADLVYFLKSK 400
    DGSTRKINYD QKVGQKISTK SVGRDEREDI THLYKYPEGS ADERRVFEKA 450
    NHQNKLLQEK QNTGLNITIK LSSGVRKGCD FDVFAIVTNG TAEEKKCRLV 500
    FASRAVSYNG VIGRECGFKD LLNVELPPGG ERKVPLRLNY SKYCNNLTED 550
    NLIRLGALLI DYSTRDAIMA MRDIVLDDPE IKIRILGEPK ENRKLAAELT 600
    IQNPLPEALQ SCCFTIEGAN LTGGDSITHT LDSSIEPGQE AKAKIYFTPT 650
    QSGLRKLLVD FNSDKLGHVR GYRNVIIGK 679
    Length:679
    Mass (Da):75,773
    Last modified:July 11, 2006 - v1
    Checksum:iCA43F4888970F033
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC117635 mRNA. Translation: AAI17636.1.
    RefSeqiNP_997821.2. NM_212656.2.
    UniGeneiDr.16524.

    Genome annotation databases

    GeneIDi323856.
    KEGGidre:323856.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC117635 mRNA. Translation: AAI17636.1 .
    RefSeqi NP_997821.2. NM_212656.2.
    UniGenei Dr.16524.

    3D structure databases

    ProteinModelPortali Q1ECX3.
    SMRi Q1ECX3. Positions 14-678.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7955.ENSDARP00000099554.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 323856.
    KEGGi dre:323856.

    Organism-specific databases

    CTDi 323856.
    ZFINi ZDB-GENE-030131-2576. tgm2b.

    Phylogenomic databases

    eggNOGi NOG80379.
    HOGENOMi HOG000231695.
    HOVERGENi HBG004342.
    InParanoidi Q1ECX3.
    KOi K05625.

    Miscellaneous databases

    NextBioi 20808462.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: WholeImported.

    Entry informationi

    Entry nameiQ1ECX3_DANRE
    AccessioniPrimary (citable) accession number: Q1ECX3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)