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Q1ECX3 (Q1ECX3_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2681 By similarity PIRSR PIRSR000459-1
Active site3271 By similarity PIRSR PIRSR000459-1
Active site3501 By similarity PIRSR PIRSR000459-1
Metal binding3901Calcium By similarity PIRSR PIRSR000459-2
Metal binding3921Calcium By similarity PIRSR PIRSR000459-2
Metal binding4381Calcium By similarity PIRSR PIRSR000459-2
Metal binding4431Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
Q1ECX3 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: CA43F4888970F033

FASTA67975,773
        10         20         30         40         50         60 
MALDIGSWDL ACKFNNTDHH TELNGTDRLI VRRGQAFTIN LQLNSGSYQP GYSQINITAE 

        70         80         90        100        110        120 
TGPDPQQQYG TRAVFSLSSE VDSSCWSAAV SSPPGESVCL SICAAPDAPI GHYTLTLDER 

       130        140        150        160        170        180 
IQIQFILLFN PWCPLDVVYM DNEEKLAEYV LAQDGIIFRG DAGYPVPLAW NFGQFEEGIL 

       190        200        210        220        230        240 
DACFRILDMN PKHRRNPAKD CSGRRNVIYV TRVLSAMINS NDQDSGVLEG CWRDTFDGGV 

       250        260        270        280        290        300 
SPMSWGGSVQ ILRTWDRSSC LPVRYGQCWV FAAVACTVAR AVGIPCRVVT NYYSAHDTNS 

       310        320        330        340        350        360 
NLLIERYVNE KGEVDHSSTR DMIWNYHCWV ESWMGRSDLP PGFDGWQASD PTPQEKSEGV 

       370        380        390        400        410        420 
FCCGPVPVRA IKEGELTFKY DAPFVFAEVN ADLVYFLKSK DGSTRKINYD QKVGQKISTK 

       430        440        450        460        470        480 
SVGRDEREDI THLYKYPEGS ADERRVFEKA NHQNKLLQEK QNTGLNITIK LSSGVRKGCD 

       490        500        510        520        530        540 
FDVFAIVTNG TAEEKKCRLV FASRAVSYNG VIGRECGFKD LLNVELPPGG ERKVPLRLNY 

       550        560        570        580        590        600 
SKYCNNLTED NLIRLGALLI DYSTRDAIMA MRDIVLDDPE IKIRILGEPK ENRKLAAELT 

       610        620        630        640        650        660 
IQNPLPEALQ SCCFTIEGAN LTGGDSITHT LDSSIEPGQE AKAKIYFTPT QSGLRKLLVD 

       670 
FNSDKLGHVR GYRNVIIGK

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References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Whole EMBL AAI17636.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC117635 mRNA. Translation: AAI17636.1.
IPIIPI00512091.
RefSeqNP_997821.2. NM_212656.2.
UniGeneDr.16524.

3D structure databases

ProteinModelPortalQ1ECX3.
SMRQ1ECX3. Positions 14-678.
ModBaseSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000099554.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID323856.
KEGGdre:323856.

Organism-specific databases

CTD323856.
ZFINZDB-GENE-030131-2576. tgm2b.

Phylogenomic databases

eggNOGNOG80379.
HOGENOMHOG000231695.
HOVERGENHBG004342.
InParanoidQ1ECX3.
KOK05625.
OMAANGRDHH.
OrthoDBEOG4HMJ8W.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49309. Transglut_C. 2 hits.
ProtoNetSearch...

Other

NextBio20808462.

Entry information

Entry nameQ1ECX3_DANRE
AccessionPrimary (citable) accession number: Q1ECX3
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 3, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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