Q1ECI2 (ERF23_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ethylene-responsive transcription factor ERF023

Gene names

Name:	ERF023
Ordered Locus Names:	At1g01250
ORF Names:	F6F3.6

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways By similarity.
Subcellular location	Nucleus Probable.
Sequence similarities	Belongs to the AP2/ERF transcription factor family. ERF subfamily. Contains 1 AP2/ERF DNA-binding domain.
Sequence caution	The sequence AAF97326.1 differs from that shown. Reason: Erroneous initiation. The sequence AAM63508.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Ethylene signaling pathway Transcription Transcription regulation
Cellular component	Nucleus
Ligand	DNA-binding
Molecular function	Activator
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ethylene mediated signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 192	192	Ethylene-responsive transcription factor ERF023		PRO_0000290383
Regions
	DNA binding	44 – 101	58	AP2/ERF
Experimental info
	Sequence conflict	10	1	S → P in AAM63508. Ref.4
	Sequence conflict	160	1	S → T in AAM63508. Ref.4

Sequences

	Sequence		Length	Mass (Da)
	Q1ECI2 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: E1B717F19F71B72E	FASTA	192	21,051
	10 20 30 40 50 60 MSPQRMKLSS PPVTNNEPTA TASAVKSCGG GGKETSSSTT RHPVYHGVRK RRWGKWVSEI 70 80 90 100 110 120 REPRKKSRIW LGSFPVPEMA AKAYDVAAFC LKGRKAQLNF PEEIEDLPRP STCTPRDIQV 130 140 150 160 170 180 AAAKAANAVK IIKMGDDDVA GIDDGDDFWE GIELPELMMS GGGWSPEPFV AGDDATWLVD 190 GDLYQYQFMA CL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Arabidopsis ORF clones." Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Full-length cDNA from Arabidopsis thaliana." Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[5]	"Genome-wide analysis of the ERF gene family in Arabidopsis and rice." Nakano T., Suzuki K., Fujimura T., Shinshi H. Plant Physiol. 140:411-432(2006) [PubMed: 16407444] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC023628 Genomic DNA. Translation: AAF97326.1. Different initiation. CP002684 Genomic DNA. Translation: AEE27261.1. BT025752 mRNA. Translation: ABF83642.1. AY086507 mRNA. Translation: AAM63508.1. Different initiation.
IPI	IPI00535297.
PIR	G86142.
RefSeq	NP_563624.1. NM_100008.3.
UniGene	At.42657.
3D structure databases
ProteinModelPortal	Q1ECI2.
SMR	Q1ECI2. Positions 44-104.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G01250.1; AT1G01250.1; AT1G01250.
GeneID	839322.
GenomeReviews	Gene locus AT1G01250 in contig CT485782_GR.
KEGG	ath:AT1G01250.
NMPDR	fig|3702.1.peg.235.
Organism-specific databases
GeneFarm	2900. 279.
TAIR	At1g01250.
Phylogenomic databases
GeneTree	EPGT00050000003143.
HOGENOM	HBG749764.
InParanoid	Q1ECI2.
OMA	FWEGIEL.
PhylomeDB	Q1ECI2.
ProtClustDB	CLSN2687605.
Gene expression databases
Genevestigator	Q1ECI2.
Family and domain databases
InterPro	IPR016177. DNA-bd_integrase-typ. IPR001471. TF_ERF_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.30.730.10. TF_ERF. 1 hit.
KO	K09286.
Pfam	PF00847. AP2. 1 hit. [Graphical view]
PRINTS	PR00367. ETHRSPELEMNT.
SMART	SM00380. AP2. 1 hit. [Graphical view]
SUPFAM	SSF54171. DNA-binding_integrase-type. 1 hit.
PROSITE	PS51032. AP2_ERF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ERF23_ARATH

Accession

Primary (citable) accession number: Q1ECI2
Secondary accession number(s): Q8LCM8, Q9LNJ6

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 12, 2007
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program