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Q1DEP0

- Q1DEP0_MYXXD

UniProt

Q1DEP0 - Q1DEP0_MYXXD

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Protein
Submitted name:

DNA ligase, ATP-dependent

Gene

MXAN_0615

Organism
Myxococcus xanthus (strain DK 1622)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
  3. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMXAN246197:GIWU-609-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, ATP-dependentImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:MXAN_0615Imported
OrganismiMyxococcus xanthus (strain DK 1622)Imported
Taxonomic identifieri246197 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
ProteomesiUP000002402: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246197.MXAN_0615.

Structurei

3D structure databases

ProteinModelPortaliQ1DEP0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1DEP0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRHGGSVMAD IADGEQVSVQ GSGSKPYILK NTGGVYSCSC PAWRNQSVAI
60 70 80 90 100
ERRTCKHLRR VRGDAAEDAR IGGDGSGAPA VPARPTRSTS ASDDTKAPPL
110 120 130 140 150
LLAQSWENDV DLTGWWMSEK LDGVRAYWDG KQFWSRLGNA FLAPEWFTAG
160 170 180 190 200
LPDFPLDGEL FGGRKRFQRT VSIVRRQDRS DDWKELAFVA FDAPGVEGTF
210 220 230 240 250
EARLERCRQW MEEAKPAYAQ WHAHARCDGT PHLRTELARV ESLGGEGLML
260 270 280 290 300
RQPGSRYEAG RSHTLLKVKS FKDDEARVVG HVAGAGRHKG RLGALEVELR
310 320 330 340 350
NGTRFSVGTG LSDAERASPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD

AAPFAAS
Length:357
Mass (Da):39,155
Last modified:July 11, 2006 - v1
Checksum:i033CE099CBC6FA9E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000113 Genomic DNA. Translation: ABF91525.1.
RefSeqiYP_628883.1. NC_008095.1.

Genome annotation databases

EnsemblBacteriaiABF91525; ABF91525; MXAN_0615.
GeneIDi4106210.
KEGGimxa:MXAN_0615.
PATRICi22643811. VBIMyxXan43560_0609.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000113 Genomic DNA. Translation: ABF91525.1 .
RefSeqi YP_628883.1. NC_008095.1.

3D structure databases

ProteinModelPortali Q1DEP0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 246197.MXAN_0615.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABF91525 ; ABF91525 ; MXAN_0615 .
GeneIDi 4106210.
KEGGi mxa:MXAN_0615.
PATRICi 22643811. VBIMyxXan43560_0609.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci MXAN246197:GIWU-609-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DK 1622Imported.

Entry informationi

Entry nameiQ1DEP0_MYXXD
AccessioniPrimary (citable) accession number: Q1DEP0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: October 1, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3