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Q1DEP0

- Q1DEP0_MYXXD

UniProt

Q1DEP0 - Q1DEP0_MYXXD

Protein
Submitted name:

DNA ligase, ATP-dependent

Gene

MXAN_0615

Organism
Myxococcus xanthus (strain DK 1622)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMXAN246197:GIWU-609-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, ATP-dependentImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:MXAN_0615Imported
    OrganismiMyxococcus xanthus (strain DK 1622)Imported
    Taxonomic identifieri246197 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
    ProteomesiUP000002402: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi246197.MXAN_0615.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1DEP0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR007527. Znf_SWIM.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1DEP0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRHGGSVMAD IADGEQVSVQ GSGSKPYILK NTGGVYSCSC PAWRNQSVAI    50
    ERRTCKHLRR VRGDAAEDAR IGGDGSGAPA VPARPTRSTS ASDDTKAPPL 100
    LLAQSWENDV DLTGWWMSEK LDGVRAYWDG KQFWSRLGNA FLAPEWFTAG 150
    LPDFPLDGEL FGGRKRFQRT VSIVRRQDRS DDWKELAFVA FDAPGVEGTF 200
    EARLERCRQW MEEAKPAYAQ WHAHARCDGT PHLRTELARV ESLGGEGLML 250
    RQPGSRYEAG RSHTLLKVKS FKDDEARVVG HVAGAGRHKG RLGALEVELR 300
    NGTRFSVGTG LSDAERASPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD 350
    AAPFAAS 357
    Length:357
    Mass (Da):39,155
    Last modified:July 11, 2006 - v1
    Checksum:i033CE099CBC6FA9E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000113 Genomic DNA. Translation: ABF91525.1.
    RefSeqiYP_628883.1. NC_008095.1.

    Genome annotation databases

    EnsemblBacteriaiABF91525; ABF91525; MXAN_0615.
    GeneIDi4106210.
    KEGGimxa:MXAN_0615.
    PATRICi22643811. VBIMyxXan43560_0609.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000113 Genomic DNA. Translation: ABF91525.1 .
    RefSeqi YP_628883.1. NC_008095.1.

    3D structure databases

    ProteinModelPortali Q1DEP0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 246197.MXAN_0615.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABF91525 ; ABF91525 ; MXAN_0615 .
    GeneIDi 4106210.
    KEGGi mxa:MXAN_0615.
    PATRICi 22643811. VBIMyxXan43560_0609.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci MXAN246197:GIWU-609-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR007527. Znf_SWIM.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DK 1622Imported.

    Entry informationi

    Entry nameiQ1DEP0_MYXXD
    AccessioniPrimary (citable) accession number: Q1DEP0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3