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Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Myxococcus xanthus (strain DK 1622)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei5Purine nucleoside; shared with dimeric partnerBy similarity1
Binding sitei21Phosphate; via amide nitrogenBy similarity1
Binding sitei25PhosphateBy similarity1
Binding sitei44Phosphate; shared with dimeric partnerBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciMXAN246197:G1G53-2268-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNPUniRule annotation
Gene namesi
Name:deoDUniRule annotation
Ordered Locus Names:MXAN_2306
OrganismiMyxococcus xanthus (strain DK 1622)
Taxonomic identifieri246197 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
Proteomesi
  • UP000002402 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000696381 – 239Purine nucleoside phosphorylase DeoD-typeAdd BLAST239

Proteomic databases

PRIDEiQ1D9Z7

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi246197.MXAN_2306

Structurei

3D structure databases

ProteinModelPortaliQ1D9Z7
SMRiQ1D9Z7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni88 – 91Phosphate bindingBy similarity4
Regioni180 – 182Purine nucleoside bindingBy similarity3
Regioni204 – 205Purine nucleoside bindingBy similarity2

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D3A Bacteria
COG0813 LUCA
HOGENOMiHOG000274896
KOiK03784
OMAiPQCLLCG
OrthoDBiPOG091H02M1

Family and domain databases

HAMAPiMF_01627 Pur_nucleosid_phosp, 1 hit
InterProiView protein in InterPro
IPR004402 DeoD-type
IPR018016 Nucleoside_phosphorylase_CS
IPR000845 Nucleoside_phosphorylase_d
IPR035994 Nucleoside_phosphorylase_sf
PANTHERiPTHR43691:SF2 PTHR43691:SF2, 1 hit
PfamiView protein in Pfam
PF01048 PNP_UDP_1, 1 hit
SUPFAMiSSF53167 SSF53167, 1 hit
TIGRFAMsiTIGR00107 deoD, 1 hit
PROSITEiView protein in PROSITE
PS01232 PNP_UDP_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q1D9Z7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATPHISAAP GDFADVVLMP GDPLRARYIS DRFLEGAREV TSVRNMLGFT
60 70 80 90 100
GTFRGRRVSV MGHGMGVPSI SIYATELIKT YGVRVIIRVG SCGALSTDVK
110 120 130 140 150
VREVIVATGA GTDSNVNRMR LMGHDFAAVA DFTLARRAME AAERRNKPVR
160 170 180 190 200
AGPVFTSDLF YHPQEQLNAT LARMGVLAVE MEVAGLYGVA AESGARALGL
210 220 230
LTVSDHIITG ESLTPQERQT TFDEMIELAL DVAHAEPTP
Length:239
Mass (Da):25,703
Last modified:July 11, 2006 - v1
Checksum:iE63417EF0A2CB905
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000113 Genomic DNA Translation: ABF90899.1
RefSeqiWP_011552381.1, NC_008095.1

Genome annotation databases

EnsemblBacteriaiABF90899; ABF90899; MXAN_2306
KEGGimxa:MXAN_2306

Similar proteinsi

Entry informationi

Entry nameiDEOD_MYXXD
AccessioniPrimary (citable) accession number: Q1D9Z7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 11, 2006
Last modified: May 23, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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