Q1D642 (Q1D642_MYXXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 13 EMBL ABF92149.1

Gene names

Ordered Locus Names:

MXAN_3694

Organism

Myxococcus xanthus (strain DK 1622) [Complete proteome] [HAMAP] EMBL ABF92149.1

Taxonomic identifier

246197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Myxococcus

Protein attributes

Sequence length	730 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABF92149.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1D642 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 77B0048F48F974C5	FASTA	730	81,686
	10 20 30 40 50 60 MEKRGSLPYK GARMKRFRLP RRLTLPALLM AAACGESDSI PIRTCDVTLT YAPQQSVAGT 70 80 90 100 110 120 VRVMGEWNNF AALSQPMTDR GDGVFTLRLD GLEPRAYGYR FVVGDKQEMD PENPYSRWVR 130 140 150 160 170 180 AEEYSRVIVP DCRQPVLELN RFTVTPEGSL DVAVSYLDGT DKAGPAVDGM VLSLDGTPRP 190 200 210 220 230 240 DAYDAASGRF ILNVQGLEQG KHHVKVVAKD SQGREAESLY LPFWVEPERF RWDSGLMYFA 250 260 270 280 290 300 FTDRFHNGRL ENDAPVADVD PIANYLGGDF AGITQKLEEG YFDALGIRTL WISPVDQNPE 310 320 330 340 350 360 GRFIGTGGKY YTGYHGYWPS KPRETQHRFG SLEELRTLTA AAHKRGIRVI ADLVLNHVHE 370 380 390 400 410 420 EHPYWANHAR DGWFNTAASC VCGTQDCDWE AKRLTCKFTD YLPDFNWRSS DFVDQFAADT 430 440 450 460 470 480 LWWLEQADFD GFRMDAVKHM EQVAGRTLRG KLKEITAMTG TEFYLVGETY VFTDGRPQIA 490 500 510 520 530 540 RYISPRELDG QFDFPLYWPV REAFADGKGL QRVDDAVRAN EEAYVPGTLN SPFLGNHDVA 550 560 570 580 590 600 RFISQAAGQL HEGGSDPFGP NRPSTVVTDP AAFEKMKYGF AFVLTQPGVP LVYYGDEVGL 610 620 630 640 650 660 PGAADPDNRR FMRFGSTLAP LERELLDFVR KLGQARRAHE ALQTGARRTL RVENDLYVFQ 670 680 690 700 710 720 RDLPNGKGAL VAINRSAVER SLVLELMGSL AASSGTYVDI FSGQTLQLTG TETVLVVPPR 730 GVAVYVPHQE

References

[1]

"Evolution of sensory complexity recorded in a myxobacterial genome." Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S., Eisen J., Ronning C.M., Barbazuk W.B., Blanchard M., Field C., Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R., Miller N., Shvartsbeyn A. , Sullivan S.A., Vaudin M., Wiegand R., Kaplan H.B. Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006) [PubMed: 17015832] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000113 Genomic DNA. Translation: ABF92149.1.
RefSeq	YP_631881.1. NC_008095.1.
3D structure databases
ProteinModelPortal	Q1D642.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1D642.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4106838.
GenomeReviews	Gene locus MXAN_3694 in contig CP000113_GR.
KEGG	mxa:MXAN_3694.
PATRIC	22649945. VBIMyxXan43560_3638.
TIGR	MXAN_3694.
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG573054.
OMA	IRVDTYS.
PhylomeDB	Q1D642.
ProtClustDB	CLSK955460.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
PRINTS	PR00110. ALPHAAMYLASE.
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1D642_MYXXD

Accession

Primary (citable) accession number: Q1D642

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)