Q1D5T2 (Q1D5T2_MYXXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA 3'-terminal phosphate cyclase EMBL ABF86055.1
EC=6.5.1.4 EMBL ABF86055.1

Gene names

Name:	rtcA EMBL ABF86055.1
Ordered Locus Names:	MXAN_3809

Organism

Myxococcus xanthus (strain DK 1622) [Complete proteome] [HAMAP] EMBL ABF86055.1

Taxonomic identifier

246197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Myxococcus

Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABF86055.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular function	RNA-3'-phosphate cyclase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1D5T2 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 125C932279EC1E20	FASTA	360	37,677
	10 20 30 40 50 60 MTGTQGPDTG LVRLDGSEGE GGGQILRSAL SLSLITGRPF HITRLRERRD PPGLRPQHLA 70 80 90 100 110 120 CVRGAEALCG GAAFSEGATV GASELSFTPA PVRAGDYLLE VGTAGSTPLL FQCLVYPLAL 130 140 150 160 170 180 AGGGRLTLRG GTHLPHSPSF HYVATVWQPV AHAYGLPVLL SLVHAGFYPE GAGEIVAEVG 190 200 210 220 230 240 PPQEPPRLVE LPARGMLREV RVSSFTGGLP FTIAERQSRA AVGALRERGI LAEADNRPLA 250 260 270 280 290 300 VTRSVGTVTF VLAQFEHTIA GFTALGERGR PAEDVGREGG EALARFMETG GALDEHLADQ 310 320 330 340 350 360 ILLPAALLAA GRLGPASPGT TRFTAARITD HLTTHARVVE RFLPVRVTVD AGGSVEVRPA

References

[1]

"Evolution of sensory complexity recorded in a myxobacterial genome." Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S., Eisen J., Ronning C.M., Barbazuk W.B., Blanchard M., Field C., Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R., Miller N., Shvartsbeyn A. , Sullivan S.A., Vaudin M., Wiegand R., Kaplan H.B. Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006) [PubMed: 17015832] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000113 Genomic DNA. Translation: ABF86055.1.
RefSeq	YP_631991.1. NC_008095.1.
3D structure databases
ProteinModelPortal	Q1D5T2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1D5T2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4100688.
GenomeReviews	Gene locus MXAN_3809 in contig CP000113_GR.
KEGG	mxa:MXAN_3809.
PATRIC	22650181. VBIMyxXan43560_3753.
TIGR	MXAN_3809.
Phylogenomic databases
eggNOG	COG0430.
HOGENOM	HBG683539.
OMA	REISFAP.
PhylomeDB	Q1D5T2.
ProtClustDB	CLSK945799.
Family and domain databases
InterPro	IPR013791. RNA3'-term_phos_cycl_insert. IPR023797. RNA3'_phos_cyclase_dom. IPR000228. RNA3'_term_phos_cyc. IPR017770. RNA3'_term_phos_cyc_type_1. IPR013796. RNA3'_term_phos_cycl_insert. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view]
Gene3D	G3DSA:3.30.360.20. G3DSA:3.30.360.20. 1 hit. G3DSA:3.65.10.20. RNA3'_term_phos_cycl. 2 hits.
KO	K01974.
PANTHER	PTHR11096. RNA3'_term_phos_cycl. 1 hit.
Pfam	PF01137. RTC. 1 hit. PF05189. RTC_insert. 1 hit. [Graphical view]
SUPFAM	SSF52913. RNA3'-term_phos_cycl_insert. 1 hit. SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMs	TIGR03399. RNA_3prim_cycl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1D5T2_MYXXD

Accession

Primary (citable) accession number: Q1D5T2

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)