Q1D523 (Q1D523_MYXXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding response regulator, LuxR family EMBL ABF86598.1

Gene names

Ordered Locus Names:

MXAN_4072

Organism

Myxococcus xanthus (strain DK 1622) [Complete proteome] [HAMAP] EMBL ABF86598.1

Taxonomic identifier

246197 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Myxococcus › Myxococcus xanthus

Protein attributes

Sequence length	246 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. SAAS SAAS000792 RuleBase RU000707 Contains 1 response regulatory domain. SAAS SAAS000792

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000792 RuleBase RU000707
Ligand	DNA-binding SAAS SAAS000792 RuleBase RU000707 EMBL ABF86598.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1D523 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 119F1DB03FAF173E	FASTA	246	27,038
	10 20 30 40 50 60 MTGAPVDAPQ PPDSPPIRVF VVEDQTKILK NQLRLFENHP EMDIIGTALS GEAALEEVPK 70 80 90 100 110 120 LMPDVLLLDL GLPRMSGIDV TREVKARFPK IEILIFTIFD EEDKVLEAVK AGASGYLLKG 130 140 150 160 170 180 APVDKIIEAI KEVRAGGTVI QPNLARRLLR HFRVEPDASP LISPPAAPEP SASDLPQEPL 190 200 210 220 230 240 LKPLSDRERE ILQLIAKGVS NSEAARLLDL SKATIRTHLE HIYRKLEVTN RVEAVTEGIR KGLISV

References

[1]

"Evolution of sensory complexity recorded in a myxobacterial genome." Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S., Eisen J., Ronning C.M., Barbazuk W.B., Blanchard M., Field C., Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R., Miller N., Shvartsbeyn A. , Sullivan S.A., Vaudin M., Wiegand R., Kaplan H.B. Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DK 1622.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000113 Genomic DNA. Translation: ABF86598.1.
RefSeq	YP_632250.1. NC_008095.1.
3D structure databases
ProteinModelPortal	Q1D523.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q1D523. 13 interactions.
STRING	246197.MXAN_4072.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF86598; ABF86598; MXAN_4072.
GeneID	4101856.
KEGG	mxa:MXAN_4072.
PATRIC	22650715. VBIMyxXan43560_4020.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2197.
HOGENOM	HOG000034813.
OMA	THLEHIY.
ProtClustDB	CLSK756542.
Enzyme and pathway databases
BioCyc	MXAN246197:GIWU-4037-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR011006. CheY-like_superfamily. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR001789. Sig_transdc_resp-reg_receiver. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00421. HTH_LUXR. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit. SSF52172. CheY_like. 1 hit.
PROSITE	PS50043. HTH_LUXR_2. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1D523_MYXXD

Accession

Primary (citable) accession number: Q1D523

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)