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Protein
Submitted name:

DNA-binding response regulator

Gene

MXAN_5313

Organism
Myxococcus xanthus (strain DK 1622)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotationImported

Enzyme and pathway databases

BioCyciMXAN246197:GIWU-5275-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding response regulatorImported
Gene namesi
Ordered Locus Names:MXAN_5313Imported
OrganismiMyxococcus xanthus (strain DK 1622)Imported
Taxonomic identifieri246197 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
ProteomesiUP000002402 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotation

Interactioni

Protein-protein interaction databases

IntActiQ1D1K9. 8 interactions.
STRINGi246197.MXAN_5313.

Structurei

3D structure databases

ProteinModelPortaliQ1D1K9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains response regulatory domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000034819.
OMAiLILKEVW.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1D1K9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTRVLLIDD DTRMYELLEQ YLGQNGLSVT HAADGGRGLA ALEASAFDAV
60 70 80 90 100
LLDVMMPGMD GLEVCKRIRA KSRIPVIMLT AKGDETDRVV GLELGADDYL
110 120 130 140 150
PKPFSPRELL ARLRAVLRRS QPSAVADRLE SGGVSIDVAG REVRVEERAV
160 170 180 190 200
ELTGLEFDLL VALVRRAGRV VPRDALLGEA GRSDTVVGER TVDVHISHLR
210 220
QKLGDVGTRL IKTVRGVGYV FAKEGP
Length:226
Mass (Da):24,541
Last modified:July 11, 2006 - v1
Checksum:i63CE772E6AEE2693
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000113 Genomic DNA. Translation: ABF92103.1.
RefSeqiWP_011555279.1. NC_008095.1.
YP_633464.1. NC_008095.1.

Genome annotation databases

EnsemblBacteriaiABF92103; ABF92103; MXAN_5313.
KEGGimxa:MXAN_5313.
PATRICi22653143. VBIMyxXan43560_5220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000113 Genomic DNA. Translation: ABF92103.1.
RefSeqiWP_011555279.1. NC_008095.1.
YP_633464.1. NC_008095.1.

3D structure databases

ProteinModelPortaliQ1D1K9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ1D1K9. 8 interactions.
STRINGi246197.MXAN_5313.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF92103; ABF92103; MXAN_5313.
KEGGimxa:MXAN_5313.
PATRICi22653143. VBIMyxXan43560_5220.

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000034819.
OMAiLILKEVW.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciMXAN246197:GIWU-5275-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DK 1622Imported.

Entry informationi

Entry nameiQ1D1K9_MYXXD
AccessioniPrimary (citable) accession number: Q1D1K9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: June 24, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.