Q1CWF0 (Q1CWF0_MYXXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL ABF93060.1
Ordered Locus Names:	MXAN_7160

Organism

Myxococcus xanthus (strain DK 1622) [Complete proteome] [HAMAP] EMBL ABF93060.1

Taxonomic identifier

246197 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Myxococcus › Myxococcus xanthus

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABF93060.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1CWF0 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 32819678F000E814	FASTA	409	44,019
	10 20 30 40 50 60 MAASVVEVNV ESIGSGPGDA VHSSWLELSA SALRHNVAVF RALEGQGAPR ALGVVLKGNA 70 80 90 100 110 120 YGHGLAQVLP VVHGEVDLLY VIAPQDALKV REYERAQGLG PRQVLVLGAV APDEAVVLAR 130 140 150 160 170 180 EGVDAVVADR GWADAAAVLR AAKLERPLRV HVHLDTGLGR EGFTLEGLPT ESRFLSESRD 190 200 210 220 230 240 VLEVVGVLSH FANTEDVTEQ GYALAQVDAF EKGLAFLSEQ LAPARPLQRH IAASAATLVL 250 260 270 280 290 300 PRARYEALRV GISLYGLWPS PETRLSARLV LGEVPVLKPV LSWRCRSQVV KWLSAGSYVG 310 320 330 340 350 360 YGCTYRCPEP TRIAVLPVGY YDGYPRLVSG KAHVLVNGRR CPVLGRVMMN HLIVDVTRAT 370 380 390 400 SDERPVTATL MGRDGEESVP AESLAGWAQT IHYELVTRLG AHLKRTVVA

References

[1]

"Evolution of sensory complexity recorded in a myxobacterial genome." Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S., Eisen J., Ronning C.M., Barbazuk W.B., Blanchard M., Field C., Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R., Miller N., Shvartsbeyn A. , Sullivan S.A., Vaudin M., Wiegand R., Kaplan H.B. Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DK 1622.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000113 Genomic DNA. Translation: ABF93060.1.
RefSeq	YP_635273.1. NC_008095.1.
3D structure databases
ProteinModelPortal	Q1CWF0.
ModBase	Search...
Protein-protein interaction databases
STRING	246197.MXAN_7160.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF93060; ABF93060; MXAN_7160.
GeneID	4107756.
KEGG	mxa:MXAN_7160.
PATRIC	22656813. VBIMyxXan43560_7051.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	RITADEM.
Enzyme and pathway databases
BioCyc	MXAN246197:GIWU-7097-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1CWF0_MYXXD

Accession

Primary (citable) accession number: Q1CWF0

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)