Q1CTP0 (Q1CTP0_HELPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Quinone-reactive Ni/Fe hydrogenase HydB EMBL ABF84682.1
EC=1.12.5.1 EMBL ABF84682.1

Gene names

Ordered Locus Names:

HPAG1_0615 EMBL ABF84682.1

Organism

Helicobacter pylori (strain HPAG1) [Complete proteome] [HAMAP] EMBL ABF84682.1

Taxonomic identifier

357544 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	578 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. RuleBase RU003896

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003896 Nickel RuleBase RU003896
Molecular function	Oxidoreductase RuleBase RU003896 EMBL ABF84682.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ferredoxin hydrogenase activity Inferred from electronic annotation. Source: InterPro hydrogen:quinone oxidoreductase activity Inferred from electronic annotation. Source: EC nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1CTP0 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 8D240ED394D649E7	FASTA	578	64,394
	10 20 30 40 50 60 MSKKIVVDPI TRIEGHLRIE VIVDDDNVIT DAFSSSTLFR GLETIIKGRD PRDAGFIAQR 70 80 90 100 110 120 ICGVCTYSHY KAGITAVENA LGITPPLNAQ LVRSLMNMAL LFHDHVVHFY TLHGLDWCDI 130 140 150 160 170 180 MSALKADPIQ AAKLSFKYSP YPINTGAGEL KAVQKRLNDF AKGGSLGPFS NGYYGHKTYR 190 200 210 220 230 240 LSPEQNLIVL SHYLKLLEIQ REAAKMTAIF GAKQPHPQSL TVGGVTSVMD ILDPTRLAEW 250 260 270 280 290 300 KSKFEVVANF INHAYYPDLV MAGEMFANEQ SVIKGCGLRN FIAYEEVLLG RDKYLLSSGV 310 320 330 340 350 360 VLDGDISKLH PIDESLIKEE VTHSWYQYED TKEVQLHPYD GQTNPHYTGL KDGESVGIEN 370 380 390 400 410 420 KIIPAKVLDT KNKYSWIKSP RYDSKPMEVG PLSSVVVGLA AKNPYVTEVA TKFLKDTKLP 430 440 450 460 470 480 LEALFSTLGR TAARCIEAKT IADNGLLAFD ALVENLKSDQ STCAPYHIDK NQEYKGRYIG 490 500 510 520 530 540 QVPRGMLSHW VRIKNGVVEN YQAVVPSTWN AGPRDSQNQR GAYEMSLIGT KIADLTQPLE 550 560 570 IIRTIHSFDP CIACSVHVMD FKGQSLNEFK VEPNFAKF

References

[1]

"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression." Oh J.D., Kling-Backhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HPAG1 EMBL ABF84682.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000241 Genomic DNA. Translation: ABF84682.1.
RefSeq	YP_627356.1. NC_008086.1.
3D structure databases
ProteinModelPortal	Q1CTP0.
ModBase	Search...
Protein-protein interaction databases
STRING	357544.HPAG1_0615.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF84682; ABF84682; HPAG1_0615.
GeneID	4098858.
KEGG	hpa:HPAG1_0615.
PATRIC	20602578. VBIHelPyl56048_0637.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0374.
HOGENOM	HOG000278799.
KO	K05922.
OMA	HLRVEVN.
ProtClustDB	CLSK872401.
Enzyme and pathway databases
BioCyc	HPYL357544:GH1F-625-MONOMER.
Family and domain databases
InterPro	IPR001501. Ni-dep_hyd_lsu. IPR018194. Ni-dep_hyd_lsu_Ni_BS. [Graphical view]
Pfam	PF00374. NiFeSe_Hases. 1 hit. [Graphical view]
PROSITE	PS00507. NI_HGENASE_L_1. 1 hit. PS00508. NI_HGENASE_L_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1CTP0_HELPH

Accession

Primary (citable) accession number: Q1CTP0

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 29, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)