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Q1CTP0 (Q1CTP0_HELPH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.12.5.1 EMBL ABF84682.1
Gene names
Ordered Locus Names:HPAG1_0615 EMBL ABF84682.1
OrganismHelicobacter pylori (strain HPAG1) [Complete proteome] [HAMAP] EMBL ABF84682.1
Taxonomic identifier357544 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length578 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q1CTP0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 8D240ED394D649E7

FASTA57864,394
        10         20         30         40         50         60 
MSKKIVVDPI TRIEGHLRIE VIVDDDNVIT DAFSSSTLFR GLETIIKGRD PRDAGFIAQR 

        70         80         90        100        110        120 
ICGVCTYSHY KAGITAVENA LGITPPLNAQ LVRSLMNMAL LFHDHVVHFY TLHGLDWCDI 

       130        140        150        160        170        180 
MSALKADPIQ AAKLSFKYSP YPINTGAGEL KAVQKRLNDF AKGGSLGPFS NGYYGHKTYR 

       190        200        210        220        230        240 
LSPEQNLIVL SHYLKLLEIQ REAAKMTAIF GAKQPHPQSL TVGGVTSVMD ILDPTRLAEW 

       250        260        270        280        290        300 
KSKFEVVANF INHAYYPDLV MAGEMFANEQ SVIKGCGLRN FIAYEEVLLG RDKYLLSSGV 

       310        320        330        340        350        360 
VLDGDISKLH PIDESLIKEE VTHSWYQYED TKEVQLHPYD GQTNPHYTGL KDGESVGIEN 

       370        380        390        400        410        420 
KIIPAKVLDT KNKYSWIKSP RYDSKPMEVG PLSSVVVGLA AKNPYVTEVA TKFLKDTKLP 

       430        440        450        460        470        480 
LEALFSTLGR TAARCIEAKT IADNGLLAFD ALVENLKSDQ STCAPYHIDK NQEYKGRYIG 

       490        500        510        520        530        540 
QVPRGMLSHW VRIKNGVVEN YQAVVPSTWN AGPRDSQNQR GAYEMSLIGT KIADLTQPLE 

       550        560        570 
IIRTIHSFDP CIACSVHVMD FKGQSLNEFK VEPNFAKF 

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References

[1]"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression."
Oh J.D., Kling-Backhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HPAG1 EMBL ABF84682.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000241 Genomic DNA. Translation: ABF84682.1.
RefSeqYP_627356.1. NC_008086.1.

3D structure databases

ProteinModelPortalQ1CTP0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357544.HPAG1_0615.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF84682; ABF84682; HPAG1_0615.
GeneID4098858.
KEGGhpa:HPAG1_0615.
PATRIC20602578. VBIHelPyl56048_0637.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0374.
HOGENOMHOG000278799.
KOK05922.
OMAQREAAKM.
OrthoDBEOG6M9DSB.
ProtClustDBCLSK872401.

Enzyme and pathway databases

BioCycHPYL357544:GH1F-625-MONOMER.

Family and domain databases

InterProIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
[Graphical view]
PfamPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
PROSITEPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1CTP0_HELPH
AccessionPrimary (citable) accession number: Q1CTP0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)