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Q1CTK0 (Q1CTK0_HELPH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.1 EMBL ABF84722.1
Gene names
Ordered Locus Names:HPAG1_0655 EMBL ABF84722.1
OrganismHelicobacter pylori (strain HPAG1) [Complete proteome] [HAMAP] EMBL ABF84722.1
Taxonomic identifier357544 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000479

Sequence similarities

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Sequences

Sequence LengthMass (Da)Tools
Q1CTK0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: F1BD674E1CC90DE9

FASTA39042,914
        10         20         30         40         50         60 
MLYSSKIQSL SESTTIAIST LAKELKSQGK DILSFSAGEP DFDTPQAIKD AAIKALNDGF 

        70         80         90        100        110        120 
TKYTPVAGIP ELLKAIAFKL KKENSLDYEP NEILVSNGAK QSLFNAIQAL IGEGDEVIIP 

       130        140        150        160        170        180 
VPFWVTYPEL VKYSNGVSKF IQTDEKSRFK ITPKQLKNAL SPKTKMLILT TPSNPTGMLY 

       190        200        210        220        230        240 
SKAELEALGE VLKDTKIWVL SDEIYEKLVY KGEFVSCAAV SEEMKKRTIT INGLSKSVAM 

       250        260        270        280        290        300 
TGWRMGYAAS KDKKLVKLMN NLQSQCTSNI NSITQMASIV ALEGLVDKEI ETMRQAFEKR 

       310        320        330        340        350        360 
CDLAHAKINA IKGLNALKPD GAFYLFINIG SLCGGDSMRF CHELLEKEGV ALVPGKAFGL 

       370        380        390 
EGYVRLSFAC SEEQIEKGIE RIARFVKSKG 

« Hide

References

[1]"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression."
Oh J.D., Kling-Backhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HPAG1 EMBL ABF84722.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000241 Genomic DNA. Translation: ABF84722.1.
RefSeqYP_627396.1. NC_008086.1.

3D structure databases

ProteinModelPortalQ1CTK0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357544.HPAG1_0655.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF84722; ABF84722; HPAG1_0655.
GeneID4098839.
KEGGhpa:HPAG1_0655.
PATRIC20602660. VBIHelPyl56048_0678.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223062.
KOK00812.
OMANSITQMA.
OrthoDBEOG6RRKNS.
ProtClustDBPRK05764.

Enzyme and pathway databases

BioCycHPYL357544:GH1F-665-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1CTK0_HELPH
AccessionPrimary (citable) accession number: Q1CTK0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 16, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)