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Q1CSJ2 (Q1CSJ2_HELPH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.4.1.214 EMBL ABF85080.1
Gene names
Ordered Locus Names:HPAG1_1013
OrganismHelicobacter pylori (strain HPAG1) [Complete proteome] [HAMAP]
Taxonomic identifier357544 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length458 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosyltransferase EMBL ABF85080.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processprotein glycosylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionglycoprotein 3-alpha-L-fucosyltransferase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1CSJ2 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: BB04DDBA6A937C89

FASTA45853,797
        10         20         30         40         50         60 
MFQPLLDAYI DSTRLDETDY KPPLNIALAN WWPLDKRESK GFRKKFILHF ILSQRYTITL 

        70         80         90        100        110        120 
HQNPNEPSDL VFGSPIGAAR KILSYQNAKR VFYTGENEVP NFNLFDYAIG FDELDFNNRY 

       130        140        150        160        170        180 
LRMPLYYDRL HHKAESVNDT TSPYKLKADS LYALKKPSHH FKEKHPNLCA VVNDESDPLK 

       190        200        210        220        230        240 
RGFASFVASN PNAPKRNAFY DALNSIEPVI GGGSVRNTLG YNVKNKNEFL SQYKFNLCFE 

       250        260        270        280        290        300 
NSQGYGYVTE KIIDAYFSHT IPIYWGSPSV AKDFNPKSFV NVHDFNNFDE AIDYVRYLHT 

       310        320        330        340        350        360 
HPNAYLDMLY ENPLNTIDGK AYFYQDLSFK KILDFFKTIL ENDTIYHDNP FIFYRDLNEP 

       370        380        390        400        410        420 
LVSIDDLRVN YDDLRVNYDD LRVNYDDLRV NYDDLRVNYD DLRVNYDDLR INYERLLQNA 

       430        440        450 
SPLLELSQNT SFKIYRKAYQ KSLPLLCAVR KWVKKLGL 

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References

[1]"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression."
Oh J.D., Kling-Baeckhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed: 16788065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000241 Genomic DNA. Translation: ABF85080.1.
RefSeqYP_627754.1. NC_008086.1.

3D structure databases

ProteinModelPortalQ1CSJ2.
SMRQ1CSJ2. Positions 1-352.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1CSJ2.

Protein family/group databases

CAZyGT10. Glycosyltransferase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4099009.
GenomeReviewsGene locus HPAG1_1013 in contig CP000241_GR.
KEGGhpa:HPAG1_1013.
PATRIC20603438. VBIHelPyl56048_1054.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG19459.
HOGENOMHBG501453.
OMAETTHKPP.
ProtClustDBCLSK496140.

Family and domain databases

InterProIPR016646. Alpha-1_3/4-FUT_helico.
IPR001503. Glyco_trans_10.
[Graphical view]
PANTHERPTHR11929. Glyco_trans_10. 1 hit.
PfamPF00852. Glyco_transf_10. 1 hit.
[Graphical view]
PIRSFPIRSF016150. Alpha1_3/4FUT_helico. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1CSJ2_HELPH
AccessionPrimary (citable) accession number: Q1CSJ2
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)