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Protein

Protein TolB

Gene

tolB

Organism
Helicobacter pylori (strain HPAG1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the TonB-independent uptake of proteins.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

BioCyciHPYL357544:GH1F-1091-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TolBUniRule annotation
Gene namesi
Name:tolBUniRule annotation
Ordered Locus Names:HPAG1_1065
OrganismiHelicobacter pylori (strain HPAG1)
Taxonomic identifieri357544 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000008835 Componenti: Chromosome

Subcellular locationi

  • Periplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1616UniRule annotationAdd
BLAST
Chaini17 – 417401Protein TolBPRO_0000259053Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the TolB family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000104174.
KOiK03641.
OMAiTFDYPIV.
OrthoDBiPOG091H04CX.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 1 hit.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q1CSE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYLWLFLIG TIGLFATDKT LDIIKTIQKL PKIEVRYSTD NDANYALKLH
60 70 80 90 100
EVLANDLKTS QHFDVSQNKD QGAINYTELK DKKVHLVALV SVAVENGNKI
110 120 130 140 150
SRLKLYDVNT STLVKTFDYP ILSADLYPFA AHNMAIVVND YLKAPSIAWM
160 170 180 190 200
KRLIVFSKYI GPGITNIALA DYTMRYQKEI IKNNRLNIFP KWANAEQTEF
210 220 230 240 250
YYTQYGERTP MILKYNIQKA THENIASSQG MAVVSSVSSD GSKILMSLAP
260 270 280 290 300
DGQPDVYLYD THKKTKTKIT RYPGIDVSGV FLEDDKSMAF VSDRSGYPNI
310 320 330 340 350
YMKKLGLKES AEQLLYEGRS NESIDAYKDS IVYVSRENLN EFGKTVFNLN
360 370 380 390 400
LITLNSKYIR RLTVNGSNQM PRFSTDGRNI MYIKKTPQEY AMGLILLDYN
410
QSFLFPLKNV KIQAFDW
Length:417
Mass (Da):47,708
Last modified:July 11, 2006 - v1
Checksum:i5146A2A7F730F952
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000241 Genomic DNA. Translation: ABF85132.1.
RefSeqiWP_001269988.1. NC_008086.1.

Genome annotation databases

EnsemblBacteriaiABF85132; ABF85132; HPAG1_1065.
KEGGihpa:HPAG1_1065.
PATRICi20603553. VBIHelPyl56048_1108.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000241 Genomic DNA. Translation: ABF85132.1.
RefSeqiWP_001269988.1. NC_008086.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF85132; ABF85132; HPAG1_1065.
KEGGihpa:HPAG1_1065.
PATRICi20603553. VBIHelPyl56048_1108.

Phylogenomic databases

HOGENOMiHOG000104174.
KOiK03641.
OMAiTFDYPIV.
OrthoDBiPOG091H04CX.

Enzyme and pathway databases

BioCyciHPYL357544:GH1F-1091-MONOMER.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 1 hit.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiTOLB_HELPH
AccessioniPrimary (citable) accession number: Q1CSE0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 11, 2006
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.