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Q1CS54 (Q1CS54_HELPH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length148 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABF85218.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionType II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1CS54 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 400ACD390A864A32

FASTA14816,945
        10         20         30         40         50         60 
MSKSKKELFL ELAQPDKNGV SRWASVTEFV GKYQGLQLGN GGSWFRNNSS LAKEFKLEFD 

        70         80         90        100        110        120 
KGQTLGNSID RIRLNGYNTE CVFNQSIRQD IKNYYKQQCC TMCGARGNSE NTQIEVDHKD 

       130        140 
DRKNDLRVSD SNTQTFDDFQ ALYKACND 

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References

[1]"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression."
Oh J.D., Kling-Backhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HPAG1 EMBL ABF85218.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000241 Genomic DNA. Translation: ABF85218.1.
RefSeqYP_627892.1. NC_008086.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357544.HPAG1_1151.

Protein family/group databases

REBASE13133. HpyHORF1149P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF85218; ABF85218; HPAG1_1151.
GeneID4099176.
KEGGhpa:HPAG1_1151.
PATRIC20603743. VBIHelPyl56048_1196.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGbactNOG42268.
HOGENOMHOG000077332.
KOK01155.
OMADGRKNDS.
OrthoDBEOG6WQD6P.
ProtClustDBCLSK483376.

Enzyme and pathway databases

BioCycHPYL357544:GH1F-1184-MONOMER.

Family and domain databases

InterProIPR003615. HNH_nuc.
IPR007979. NlaIII/ICEA1.
[Graphical view]
PfamPF05315. ICEA. 1 hit.
[Graphical view]
SMARTSM00507. HNHc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1CS54_HELPH
AccessionPrimary (citable) accession number: Q1CS54
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)