Q1CS54 (Q1CS54_HELPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
IceA1 EMBL ABF85218.1
EC=3.1.21.4 EMBL ABF85218.1

Gene names

Ordered Locus Names:

HPAG1_1151 EMBL ABF85218.1

Organism

Helicobacter pylori (strain HPAG1) [Complete proteome] [HAMAP] EMBL ABF85218.1

Taxonomic identifier

357544 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABF85218.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1CS54 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 400ACD390A864A32	FASTA	148	16,945
	10 20 30 40 50 60 MSKSKKELFL ELAQPDKNGV SRWASVTEFV GKYQGLQLGN GGSWFRNNSS LAKEFKLEFD 70 80 90 100 110 120 KGQTLGNSID RIRLNGYNTE CVFNQSIRQD IKNYYKQQCC TMCGARGNSE NTQIEVDHKD 130 140 DRKNDLRVSD SNTQTFDDFQ ALYKACND

References

[1]

"The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression." Oh J.D., Kling-Backhed H., Giannakis M., Xu J., Fulton R.S., Fulton L.A., Cordum H.S., Wang C., Elliott G., Edwards J., Mardis E.R., Engstrand L.G., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:9999-10004(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HPAG1 EMBL ABF85218.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000241 Genomic DNA. Translation: ABF85218.1.
RefSeq	YP_627892.1. NC_008086.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	357544.HPAG1_1151.
Protein family/group databases
REBASE	13133. HpyHORF1149P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF85218; ABF85218; HPAG1_1151.
GeneID	4099176.
KEGG	hpa:HPAG1_1151.
PATRIC	20603743. VBIHelPyl56048_1196.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	bactNOG42268.
HOGENOM	HOG000077332.
KO	K01155.
OMA	WSAKNIK.
ProtClustDB	CLSK483376.
Enzyme and pathway databases
BioCyc	HPYL357544:GH1F-1192-MONOMER.
Family and domain databases
InterPro	IPR003615. HNH_nuc. IPR007979. NlaIII/ICEA1. [Graphical view]
Pfam	PF05315. ICEA. 1 hit. [Graphical view]
SMART	SM00507. HNHc. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1CS54_HELPH

Accession

Primary (citable) accession number: Q1CS54

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)