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Q1CNF8

- GLPB_YERPN

UniProt

Q1CNF8 - GLPB_YERPN

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Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FMN.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciYPES377628:GIXK-156-MONOMER.
UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
Short name:
Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
Short name:
Anaerobic G3Pdhase BUniRule annotation
Gene namesi
Name:glpBUniRule annotation
Ordered Locus Names:YPN_0139
ORF Names:YP516_0102
OrganismiYersinia pestis bv. Antiqua (strain Nepal516)
Taxonomic identifieri377628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000008936: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 424424Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_0000258912Add
BLAST

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

Protein-protein interaction databases

STRINGi377628.YPN_0139.

Structurei

3D structure databases

ProteinModelPortaliQ1CNF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3075.
HOGENOMiHOG000278489.
KOiK00112.
OMAiFRSVNIS.
OrthoDBiEOG6K6V62.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1CNF8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKFDVIIIGG GLAGLACGIR LAEQGKYCAI VSSGQNALHF SSGSLDLLAK
60 70 80 90 100
LPDGQAVSQP LSALSALAEL APEHPYSKMR NITQLDELVQ EAEALLRRCG
110 120 130 140 150
LDIVGSSAEN HLRLTPLGSC RPTWLSLADI PVAPLNGPLP WQRVAVIGIE
160 170 180 190 200
GFLDFQPQMV ASALQDQGID ATADYLHLPA LDRLRDNPSE FRAVNIARIL
210 220 230 240 250
DLPENRQPLA DELSRLSSTA EMILLPACIG LDKSAPLDAL RAVVGKPIQL
260 270 280 290 300
LPTLPPSLLG MRLHQALRHR FQQLGGLVMP GDAVLRAELV DNRITGLYSR
310 320 330 340 350
NHGDIPLRAA QMVLASGSFF SNGLVATFDK IYEPILDLDI LSLPHRADWS
360 370 380 390 400
HSNLFAPQPY LQFGVNTDNH LRPLRGGVAL ENLHAIGAVL GGYDPLQQGC
410 420
GAGVSLTSAV FVAEQIISEM AVTL
Length:424
Mass (Da):45,506
Last modified:July 11, 2006 - v1
Checksum:iCEC65C3081A809E7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG16472.1.
ACNQ01000001 Genomic DNA. Translation: EEO78584.1.
RefSeqiYP_646072.1. NC_008149.1.

Genome annotation databases

EnsemblBacteriaiABG16472; ABG16472; YPN_0139.
EEO78584; EEO78584; YP516_0102.
GeneIDi4123676.
KEGGiypn:YPN_0139.
PATRICi18599193. VBIYerPes46733_0295.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG16472.1 .
ACNQ01000001 Genomic DNA. Translation: EEO78584.1 .
RefSeqi YP_646072.1. NC_008149.1.

3D structure databases

ProteinModelPortali Q1CNF8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 377628.YPN_0139.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG16472 ; ABG16472 ; YPN_0139 .
EEO78584 ; EEO78584 ; YP516_0102 .
GeneIDi 4123676.
KEGGi ypn:YPN_0139.
PATRICi 18599193. VBIYerPes46733_0295.

Phylogenomic databases

eggNOGi COG3075.
HOGENOMi HOG000278489.
KOi K00112.
OMAi FRSVNIS.
OrthoDBi EOG6K6V62.

Enzyme and pathway databases

UniPathwayi UPA00618 ; UER00673 .
BioCyci YPES377628:GIXK-156-MONOMER.

Family and domain databases

HAMAPi MF_00753. Glycerol3P_GlpB.
InterProi IPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
[Graphical view ]
PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
    Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
    J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nepal516.
  2. "Yersinia pestis Nepal516A whole genome shotgun sequencing project."
    Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
    Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGLPB_YERPN
AccessioniPrimary (citable) accession number: Q1CNF8
Secondary accession number(s): D1Q130
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 11, 2006
Last modified: October 1, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3