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Q1CNF8

- GLPB_YERPN

UniProt

Q1CNF8 - GLPB_YERPN

Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

    Cofactori

    FMN.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Flavoprotein, FMN

    Enzyme and pathway databases

    BioCyciYPES377628:GIXK-156-MONOMER.
    UniPathwayiUPA00618; UER00673.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
    Short name:
    Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
    Short name:
    Anaerobic G3Pdhase BUniRule annotation
    Gene namesi
    Name:glpBUniRule annotation
    Ordered Locus Names:YPN_0139
    ORF Names:YP516_0102
    OrganismiYersinia pestis bv. Antiqua (strain Nepal516)
    Taxonomic identifieri377628 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000008936: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 424424Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_0000258912Add
    BLAST

    Interactioni

    Subunit structurei

    Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

    Protein-protein interaction databases

    STRINGi377628.YPN_0139.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1CNF8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3075.
    HOGENOMiHOG000278489.
    KOiK00112.
    OMAiFRSVNIS.
    OrthoDBiEOG6K6V62.

    Family and domain databases

    HAMAPiMF_00753. Glycerol3P_GlpB.
    InterProiIPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1CNF8-1 [UniParc]FASTAAdd to Basket

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    MKFDVIIIGG GLAGLACGIR LAEQGKYCAI VSSGQNALHF SSGSLDLLAK    50
    LPDGQAVSQP LSALSALAEL APEHPYSKMR NITQLDELVQ EAEALLRRCG 100
    LDIVGSSAEN HLRLTPLGSC RPTWLSLADI PVAPLNGPLP WQRVAVIGIE 150
    GFLDFQPQMV ASALQDQGID ATADYLHLPA LDRLRDNPSE FRAVNIARIL 200
    DLPENRQPLA DELSRLSSTA EMILLPACIG LDKSAPLDAL RAVVGKPIQL 250
    LPTLPPSLLG MRLHQALRHR FQQLGGLVMP GDAVLRAELV DNRITGLYSR 300
    NHGDIPLRAA QMVLASGSFF SNGLVATFDK IYEPILDLDI LSLPHRADWS 350
    HSNLFAPQPY LQFGVNTDNH LRPLRGGVAL ENLHAIGAVL GGYDPLQQGC 400
    GAGVSLTSAV FVAEQIISEM AVTL 424
    Length:424
    Mass (Da):45,506
    Last modified:July 11, 2006 - v1
    Checksum:iCEC65C3081A809E7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000305 Genomic DNA. Translation: ABG16472.1.
    ACNQ01000001 Genomic DNA. Translation: EEO78584.1.
    RefSeqiYP_646072.1. NC_008149.1.

    Genome annotation databases

    EnsemblBacteriaiABG16472; ABG16472; YPN_0139.
    EEO78584; EEO78584; YP516_0102.
    GeneIDi4123676.
    KEGGiypn:YPN_0139.
    PATRICi18599193. VBIYerPes46733_0295.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000305 Genomic DNA. Translation: ABG16472.1 .
    ACNQ01000001 Genomic DNA. Translation: EEO78584.1 .
    RefSeqi YP_646072.1. NC_008149.1.

    3D structure databases

    ProteinModelPortali Q1CNF8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 377628.YPN_0139.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG16472 ; ABG16472 ; YPN_0139 .
    EEO78584 ; EEO78584 ; YP516_0102 .
    GeneIDi 4123676.
    KEGGi ypn:YPN_0139.
    PATRICi 18599193. VBIYerPes46733_0295.

    Phylogenomic databases

    eggNOGi COG3075.
    HOGENOMi HOG000278489.
    KOi K00112.
    OMAi FRSVNIS.
    OrthoDBi EOG6K6V62.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00673 .
    BioCyci YPES377628:GIXK-156-MONOMER.

    Family and domain databases

    HAMAPi MF_00753. Glycerol3P_GlpB.
    InterProi IPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
      Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
      J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Nepal516.
    2. "Yersinia pestis Nepal516A whole genome shotgun sequencing project."
      Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
      Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiGLPB_YERPN
    AccessioniPrimary (citable) accession number: Q1CNF8
    Secondary accession number(s): D1Q130
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3