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Q1CN91 (Q1CN91_YERPN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.3.4.15 EMBL EEO78492.1

Bifunctional protein BirA EMBL ABG16539.1
EC=6.3.4.15 EMBL ABG16539.1
Gene names
Name:birA EMBL EEO78492.1
Ordered Locus Names:YPN_0206 EMBL ABG16539.1
ORF Names:YP516_0181 EMBL EEO78492.1
OrganismYersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP] EMBL ABG16539.1
Taxonomic identifier377628 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1CN91 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: B58E9306939E3B2A

FASTA31935,165
        10         20         30         40         50         60 
MKDIRVPLRL VSILSDGFFH SGEQLGETLG MSRAAINKHM QTIRDWGLDV FTVPGKGYSL 

        70         80         90        100        110        120 
PTSIQLLDEQ KILSYLPTGH VTVLPVVDST NQYLLDRITE LKSGDACVAE YQQAGRGRRG 

       130        140        150        160        170        180 
RQWVSPFGAN LYLSMYWRLE QGPAAAMGLS LVVGIVMAEV LQNLGAEKVR VKWPNDLYLN 

       190        200        210        220        230        240 
DKKLAGILVE LTGKTGDAAQ LVIGAGINLT MRGSETNAIN QDWINLQDAG VTIDRNKLTA 

       250        260        270        280        290        300 
EILSELRLAV VKFENEGLSA FLSRWQKMDN YLNRPVKLII GNQEIFGIAR GIDQQGALLL 

       310 
EQDGNIKPYI GGEISLRGV 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL ABG16539.1.
[2]"Complete sequence of chromosome of Yersinia pestis Nepal516."
US DOE Joint Genome Institute
Barry K., Lucas S., Lapidus A., Copeland A., Detter J.C., Glavina del Rio T., Hammon N., Dalin E., Tice H., Pitluck S., Chain P., Hu P., Malfatti S.A., Radnedge L., Vergez L.M., Larimer F., Land M., Hauser L. expand/collapse author list , Worsham P., Chu M.C., Andersen G., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Nepal516 EMBL ABG16539.1.
[3]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516.
[4]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL EEO78492.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000305 Genomic DNA. Translation: ABG16539.1.
ACNQ01000003 Genomic DNA. Translation: EEO78492.1.
RefSeqYP_646139.1. NC_008149.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING377628.YPN_0206.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG16539; ABG16539; YPN_0206.
EEO78492; EEO78492; YP516_0181.
GeneID4126530.
KEGGypn:YPN_0206.
PATRIC18599349. VBIYerPes46733_0368.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0340.
HOGENOMHOG000041812.
KOK03524.
OMAADVCHVV.
OrthoDBEOG6DNTBX.

Enzyme and pathway databases

BioCycYPES377628:GIXK-228-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR004408. Biotin_CoA_COase_ligase.
IPR004409. Biotin_operon_repress_HTH.
IPR003142. BPL_C.
IPR004143. BPL_LipA_LipB.
IPR013196. HTH_11.
IPR008988. Transcriptional_repressor_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERPTHR12835. PTHR12835. 1 hit.
PfamPF02237. BPL_C. 1 hit.
PF03099. BPL_LplA_LipB. 1 hit.
PF08279. HTH_11. 1 hit.
[Graphical view]
SUPFAMSSF50037. SSF50037. 1 hit.
TIGRFAMsTIGR00121. birA_ligase. 1 hit.
TIGR00122. birA_repr_reg. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1CN91_YERPN
AccessionPrimary (citable) accession number: Q1CN91
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: July 9, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)