Q1CN03 (Q1CN03_YERPN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectinesterase EMBL ABG16627.1
EC=3.1.1.11 EMBL ABG16627.1

Submitted name:
Putative pectinesterase EMBL EEO78077.1
EC=3.1.1.11 EMBL EEO78077.1

Gene names

Ordered Locus Names:	YPN_0294
ORF Names:	YP516_0295 EMBL EEO78077.1

Organism

Yersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP]

Taxonomic identifier

377628 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	361 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
Domain	Signal EMBL ABG16627.1
Molecular function	Hydrolase EMBL ABG16627.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall modification Inferred from electronic annotation. Source: InterPro
Cellular component	cell wall Inferred from electronic annotation. Source: InterPro
Molecular function	pectinesterase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL ABG16627.1
	Chain	27 – 361	335	Potential EMBL ABG16627.1		PRO_5000115075

Sequences

	Sequence		Length	Mass (Da)
	Q1CN03 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 93D07488E449A564	FASTA	361	39,451
	10 20 30 40 50 60 MPINALSKTL LLGLISFAAL GEVSAAQYNA VVSAMAQGDE FSSINAALQS APPDSSPFVI 70 80 90 100 110 120 FLKKGVYTER LEVNRDNVTL KGEERDTTVI GANTAAGMLN PQGTKWGTSG SSTVLVNAAN 130 140 150 160 170 180 FTAENLTIRN DFDFPANQAK AEGDPTKLKD TQAVALLLAE KSDKARFRQV KLEGYQDTLY 190 200 210 220 230 240 SKTGSRSYFT DCDISGHVDF IFGSGVTVFD RCNIIARDRR DISPPYGYIT APSTQNTAPY 250 260 270 280 290 300 GLIVLNSRLT KEPGVPAKSF ALGRPWHPTT AFDDGRYADP AAIGQAVFIN TVMDDHIYGW 310 320 330 340 350 360 DKMSGKDKQG EKVWFYPQDS RFFEANNQGP GAEINEGRRQ LSAEQLKAFT LPMIFPDWTV Q

References

[1]

"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen." Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L. J. Bacteriol. 188:4453-4463(2006) [PubMed: 16740952] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516.

[2]

"Yersinia pestis Nepal516A whole genome shotgun sequencing project." Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S. Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516 EMBL EEO78077.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000305 Genomic DNA. Translation: ABG16627.1. ACNQ01000006 Genomic DNA. Translation: EEO78077.1.
RefSeq	YP_646227.1. NC_008149.1.
3D structure databases
ProteinModelPortal	Q1CN03.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1CN03.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4123117.
GenomeReviews	Gene locus YPN_0294 in contig CP000305_GR.
KEGG	ypn:YPN_0294.
PATRIC	18599567. VBIYerPes46733_0469.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4677.
HOGENOM	HBG747179.
OMA	VFLNTSM.
ProtClustDB	CLSK888480.
Enzyme and pathway databases
BioCyc	YPES377628:YPN_0294-MONOMER.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. IPR000070. Pectinesterase_cat. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01051.
Pfam	PF01095. Pectinesterase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1CN03_YERPN

Accession

Primary (citable) accession number: Q1CN03

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)