Q1CMH5 (Q1CMH5_YERPN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sugar phosphorylase EMBL EEO78262.1

Gene names

Ordered Locus Names:	YPN_0473
ORF Names:	YP516_0490 EMBL EEO78262.1

Organism

Yersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP]

Taxonomic identifier

377628 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	1117 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1CMH5 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: E8B3269482605923	FASTA	1,117	126,454
	10 20 30 40 50 60 MITKSITNVV HSAQGGVLQF NFMQGNMLKN MLAGDIMLNL FDTPRLDMAI ANIFLRQLDD 70 80 90 100 110 120 SGIVRVTPLL FHNDQLVTYK NAQDEIIWQT TAPDFTAFVT LSFSHEQEET YYYSVRVENH 130 140 150 160 170 180 SAQALRYDLI YGQDLSLSDA GATKTNESYC SQYLDHKVFS LDKYGYTVSS RQNLPQSTGN 190 200 210 220 230 240 PLLQLGSFSP AVGFSTDGYQ FFAKQYKFSH LPTIVTEPSL ENRNYQYEMA YVALQLQPVT 250 260 270 280 290 300 LSAGDSADSV FYGFYLSHQP EANIAQAFDV ARIRANYRQP QREPATEQAS PTQQGYDQRP 310 320 330 340 350 360 LSGDKLTAEE IEQLFDGEKQ FVEQLDGELL SFFYQEANYV TLAEKERHLE RPTGHIISSG 370 380 390 400 410 420 NNIDFTNPIM NSTHYIYGVF NSHLTLGNTS FNKLLGVNRN MLNQFKSSGQ RILVQIGGEY 430 440 450 460 470 480 RILAMPSAYE VGANFSRWIY KLAEGMIQVR AFASQSEPVI QLDIAVSGHS QPLNVIVSHQ 490 500 510 520 530 540 LIMGNLEEEA TVQVERHGDL LQISRTGDDH GPRFSIATRG GFTGVERYVD SDSQGVQYLL 550 560 570 580 590 600 LQGQIAQQAS IAFGGVLNGV DSRGKWLDFE HERQAYHAQY RALLNDFSVS FSAAPQQAQK 610 620 630 640 650 660 LNHAMHWFTH NALTHYSSPH GLEQPAGAAW GTRDVSQGPI EFFMAMGRYQ QVEAILCQTY 670 680 690 700 710 720 RHQYLETGTW PQWFMFDEYA QVQQQESHGD IVVWPLKALA DYLLATDRVA LLDTRLSYTS 730 740 750 760 770 780 IKQNFAFTGE QETLLQHVQR QIDHIVAHLV PGTYLSSYGD GDWDDTLQPA NQSLRENMVS 790 800 810 820 830 840 GWTIPLTLQT LKTLTKALQA YPQFADFIAR IVTLTSNMEA DYHKYLIKDG VISGFIHFNQ 850 860 870 880 890 900 GEAEYLLHPT DTTTQIKYRL LPAKRSIISE SFDKEMAEQH MKIIMDNLMY PDGVRLMDRM 910 920 930 940 950 960 AEYKAGKQTY FKRAELSANL GRENGLQYCH AHIRFIEALC KMGMAQELYD NLFKTIPVGI 970 980 990 1000 1010 1020 QESVPNAELR QANSYFSSSD AKFDDRYQAY NNFDQLKTGA VAAKAGWRIY SSGPGIYINQ 1030 1040 1050 1060 1070 1080 IVSNVLGVRY QAGDLLLDPV ISRQFGDVTL NYQLYNLPVT LRIYPQQGEF TPKRVLLDGQ 1090 1100 1110 SLAFTLQDNP YRSGAALIHR QEIEGRLTAH SQLEIYL

References

[1]

"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen." Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L. J. Bacteriol. 188:4453-4463(2006) [PubMed: 16740952] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516.

[2]

"Yersinia pestis Nepal516A whole genome shotgun sequencing project." Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S. Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516 EMBL EEO78262.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000305 Genomic DNA. Translation: ABG16805.1. ACNQ01000006 Genomic DNA. Translation: EEO78262.1.
RefSeq	YP_646405.1. NC_008149.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1CMH5.
Protein family/group databases
CAZy	GH94. Glycoside Hydrolase Family 94.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4124913.
GenomeReviews	Gene locus YPN_0473 in contig CP000305_GR.
KEGG	ypn:YPN_0473.
PATRIC	18599963. VBIYerPes46733_0667.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3459.
HOGENOM	HBG529687.
OMA	PHGLEQY.
ProtClustDB	CLSK888533.
Enzyme and pathway databases
BioCyc	YPES377628:YPN_0473-MONOMER.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1CMH5_YERPN

Accession

Primary (citable) accession number: Q1CMH5

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)