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Q1CK56

- Q1CK56_YERPN

UniProt

Q1CK56 - Q1CK56_YERPN

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

YPN_1294

Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciYPES377628:GIXK-1346-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
    Gene namesi
    Ordered Locus Names:YPN_1294Imported
    OrganismiYersinia pestis bv. Antiqua (strain Nepal516)Imported
    Taxonomic identifieri377628 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000008936: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi377628.YPN_1294.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1CK56.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiNSFTHTA.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1CK56-1 [UniParc]FASTAAdd to Basket

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    MAYQQERIMS HRELEQRRKE ATPRGIGVLC DFYAVRAENA TLWDEQGREY    50
    IDFTAGIATL NIGHRHPKVM AAVRQQLDQF THTAYQVVPY ASYVTLAEKI 100
    NSLAPISDSN MTAAGNSKTA FFTTGVEAIE NAVKIARAAT GRPGVIAFSG 150
    AFHGRTLLAM ALTGRAVPYK VGFGPFPASI FHALYPNELY GVSVEEAISS 200
    VERLFRCDIS PTQVAAILFE PIQGEGGFNI APPEFVSALR TLCDEHGILL 250
    IADEVQTGFA RTGKLFAMEY YPDTKVDVIT MAKSLGGGMP ISAVTGRADI 300
    MDAPLPGSLG GTYAGNPLAV AASLAVLDII AEEKLCERAL ILGAKLVDVL 350
    EKAQMSNAAI VGIRARGSMV AVEFNDPVSG KPSPELTRAY QRQALEEGLL 400
    LLSCGVHSNV IRFLYPLTIP DKQFKQAMNI LTRLLAS 437
    Length:437
    Mass (Da):47,183
    Last modified:July 11, 2006 - v1
    Checksum:i27AF3A9835398EDE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000305 Genomic DNA. Translation: ABG17624.1.
    RefSeqiYP_647224.1. NC_008149.1.

    Genome annotation databases

    EnsemblBacteriaiABG17624; ABG17624; YPN_1294.
    GeneIDi4125211.
    KEGGiypn:YPN_1294.
    PATRICi18601893. VBIYerPes46733_1613.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000305 Genomic DNA. Translation: ABG17624.1 .
    RefSeqi YP_647224.1. NC_008149.1.

    3D structure databases

    ProteinModelPortali Q1CK56.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 377628.YPN_1294.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG17624 ; ABG17624 ; YPN_1294 .
    GeneIDi 4125211.
    KEGGi ypn:YPN_1294.
    PATRICi 18601893. VBIYerPes46733_1613.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi NSFTHTA.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci YPES377628:GIXK-1346-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
      Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
      J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Nepal516Imported.

    Entry informationi

    Entry nameiQ1CK56_YERPN
    AccessioniPrimary (citable) accession number: Q1CK56
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3