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Q1CK56

- Q1CK56_YERPN

UniProt

Q1CK56 - Q1CK56_YERPN

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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene
YPN_1294
Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciYPES377628:GIXK-1346-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:YPN_1294Imported
OrganismiYersinia pestis bv. Antiqua (strain Nepal516)Imported
Taxonomic identifieri377628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000008936: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi377628.YPN_1294.

Structurei

3D structure databases

ProteinModelPortaliQ1CK56.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK00823.
OMAiNSFTHTA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1CK56-1 [UniParc]FASTAAdd to Basket

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MAYQQERIMS HRELEQRRKE ATPRGIGVLC DFYAVRAENA TLWDEQGREY    50
IDFTAGIATL NIGHRHPKVM AAVRQQLDQF THTAYQVVPY ASYVTLAEKI 100
NSLAPISDSN MTAAGNSKTA FFTTGVEAIE NAVKIARAAT GRPGVIAFSG 150
AFHGRTLLAM ALTGRAVPYK VGFGPFPASI FHALYPNELY GVSVEEAISS 200
VERLFRCDIS PTQVAAILFE PIQGEGGFNI APPEFVSALR TLCDEHGILL 250
IADEVQTGFA RTGKLFAMEY YPDTKVDVIT MAKSLGGGMP ISAVTGRADI 300
MDAPLPGSLG GTYAGNPLAV AASLAVLDII AEEKLCERAL ILGAKLVDVL 350
EKAQMSNAAI VGIRARGSMV AVEFNDPVSG KPSPELTRAY QRQALEEGLL 400
LLSCGVHSNV IRFLYPLTIP DKQFKQAMNI LTRLLAS 437
Length:437
Mass (Da):47,183
Last modified:July 11, 2006 - v1
Checksum:i27AF3A9835398EDE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG17624.1.
RefSeqiYP_647224.1. NC_008149.1.

Genome annotation databases

EnsemblBacteriaiABG17624; ABG17624; YPN_1294.
GeneIDi4125211.
KEGGiypn:YPN_1294.
PATRICi18601893. VBIYerPes46733_1613.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG17624.1 .
RefSeqi YP_647224.1. NC_008149.1.

3D structure databases

ProteinModelPortali Q1CK56.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 377628.YPN_1294.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG17624 ; ABG17624 ; YPN_1294 .
GeneIDi 4125211.
KEGGi ypn:YPN_1294.
PATRICi 18601893. VBIYerPes46733_1613.

Phylogenomic databases

HOGENOMi HOG000020206.
KOi K00823.
OMAi NSFTHTA.
OrthoDBi EOG6QVRHN.

Enzyme and pathway databases

BioCyci YPES377628:GIXK-1346-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
    Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
    J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nepal516Imported.

Entry informationi

Entry nameiQ1CK56_YERPN
AccessioniPrimary (citable) accession number: Q1CK56
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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