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Q1CK56 (Q1CK56_YERPN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ABG17624.1
Gene names
Ordered Locus Names:YPN_1294 EMBL ABG17624.1
OrganismYersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP] EMBL ABG17624.1
Taxonomic identifier377628 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q1CK56 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 27AF3A9835398EDE

FASTA43747,183
        10         20         30         40         50         60 
MAYQQERIMS HRELEQRRKE ATPRGIGVLC DFYAVRAENA TLWDEQGREY IDFTAGIATL 

        70         80         90        100        110        120 
NIGHRHPKVM AAVRQQLDQF THTAYQVVPY ASYVTLAEKI NSLAPISDSN MTAAGNSKTA 

       130        140        150        160        170        180 
FFTTGVEAIE NAVKIARAAT GRPGVIAFSG AFHGRTLLAM ALTGRAVPYK VGFGPFPASI 

       190        200        210        220        230        240 
FHALYPNELY GVSVEEAISS VERLFRCDIS PTQVAAILFE PIQGEGGFNI APPEFVSALR 

       250        260        270        280        290        300 
TLCDEHGILL IADEVQTGFA RTGKLFAMEY YPDTKVDVIT MAKSLGGGMP ISAVTGRADI 

       310        320        330        340        350        360 
MDAPLPGSLG GTYAGNPLAV AASLAVLDII AEEKLCERAL ILGAKLVDVL EKAQMSNAAI 

       370        380        390        400        410        420 
VGIRARGSMV AVEFNDPVSG KPSPELTRAY QRQALEEGLL LLSCGVHSNV IRFLYPLTIP 

       430 
DKQFKQAMNI LTRLLAS 

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References

[1]"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL ABG17624.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000305 Genomic DNA. Translation: ABG17624.1.
RefSeqYP_647224.1. NC_008149.1.

3D structure databases

ProteinModelPortalQ1CK56.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING377628.YPN_1294.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG17624; ABG17624; YPN_1294.
GeneID4125211.
KEGGypn:YPN_1294.
PATRIC18601893. VBIYerPes46733_1613.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK00823.
OMANSFTHTA.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycYPES377628:GIXK-1346-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1CK56_YERPN
AccessionPrimary (citable) accession number: Q1CK56
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)