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Q1CJX3 (Q1CJX3_YERPN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative aminotransferase EMBL EEO77831.1
EC=2.6.1.- EMBL EEO77831.1
Gene names
Ordered Locus Names:YPN_1377 EMBL ABG17707.1
ORF Names:YP516_1518 EMBL EEO77831.1
OrganismYersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP] EMBL ABG17707.1
Taxonomic identifier377628 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length393 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ABG17707.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1CJX3 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 53F15E1B9DA54374

FASTA39344,594
        10         20         30         40         50         60 
MDYNFDEVID RSNTACEKWD AHYLNARFGM TDLTPMWVAD MDFRSPDSVI SALSERVNHG 

        70         80         90        100        110        120 
IYGYTFRPDS FLDAITQWVK KRHQWLIKPE WISHSPGVVP GLAMAIRGLT KPGDKILIQS 

       130        140        150        160        170        180 
PVYHHFANVI ARNDREVVAS ELLYDNEKYD IDFAHFEACI ATGVKLFILC NPHNPVGRVW 

       190        200        210        220        230        240 
TRDELTTMGN ICLRHNVIVI ADEIHCDIVF KGSKFTPFAS ISPDFENNSI TCMAPSKTFN 

       250        260        270        280        290        300 
LLGTQTSAII IPNQELRNKY ETELNSLALG NPNPFGVIAL ETAYKEGEEW LESLLGYLQH 

       310        320        330        340        350        360 
NLDFAVDFFK KYIPKITLVK PEGTYLLWLD CRGLGLTPYE LEQFILTKAK LALNEGHIFG 

       370        380        390 
ESGENFMRMN IGCPKSVLTT ALIQLKYAVD DLN 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL ABG17707.1.
[2]"Complete sequence of chromosome of Yersinia pestis Nepal516."
US DOE Joint Genome Institute
Barry K., Lucas S., Lapidus A., Copeland A., Detter J.C., Glavina del Rio T., Hammon N., Dalin E., Tice H., Pitluck S., Chain P., Hu P., Malfatti S.A., Radnedge L., Vergez L.M., Larimer F., Land M., Hauser L. expand/collapse author list , Worsham P., Chu M.C., Andersen G., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Nepal516 EMBL ABG17707.1.
[3]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL EEO77831.1.
[4]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000305 Genomic DNA. Translation: ABG17707.1.
ACNQ01000008 Genomic DNA. Translation: EEO77831.1.
RefSeqYP_647307.1. NC_008149.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING377628.YPN_1377.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG17707; ABG17707; YPN_1377.
EEO77831; EEO77831; YP516_1518.
GeneID4126166.
KEGGypn:YPN_1377.
PATRIC18602081. VBIYerPes46733_1707.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1168.
HOGENOMHOG000223048.
KOK14155.
OMATKPEGSF.
OrthoDBEOG6D8BBF.
ProtClustDBCLSK889386.

Enzyme and pathway databases

BioCycYPES377628:GIXK-1429-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1CJX3_YERPN
AccessionPrimary (citable) accession number: Q1CJX3
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)