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Protein
Submitted name:

Aminotransferase

Gene

YPN_1377

Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciYPES377628:GIXK-1429-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported
Submitted name:
Putative aminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Ordered Locus Names:YPN_1377Imported
ORF Names:YP516_1518Imported
OrganismiYersinia pestis bv. Antiqua (strain Nepal516)Imported
Taxonomic identifieri377628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000008936 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi377628.YPN_1377.

Structurei

3D structure databases

ProteinModelPortaliQ1CJX3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1168.
HOGENOMiHOG000223048.
KOiK14155.
OMAiTKPEGSF.
OrthoDBiEOG6D8BBF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1CJX3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDYNFDEVID RSNTACEKWD AHYLNARFGM TDLTPMWVAD MDFRSPDSVI
60 70 80 90 100
SALSERVNHG IYGYTFRPDS FLDAITQWVK KRHQWLIKPE WISHSPGVVP
110 120 130 140 150
GLAMAIRGLT KPGDKILIQS PVYHHFANVI ARNDREVVAS ELLYDNEKYD
160 170 180 190 200
IDFAHFEACI ATGVKLFILC NPHNPVGRVW TRDELTTMGN ICLRHNVIVI
210 220 230 240 250
ADEIHCDIVF KGSKFTPFAS ISPDFENNSI TCMAPSKTFN LLGTQTSAII
260 270 280 290 300
IPNQELRNKY ETELNSLALG NPNPFGVIAL ETAYKEGEEW LESLLGYLQH
310 320 330 340 350
NLDFAVDFFK KYIPKITLVK PEGTYLLWLD CRGLGLTPYE LEQFILTKAK
360 370 380 390
LALNEGHIFG ESGENFMRMN IGCPKSVLTT ALIQLKYAVD DLN
Length:393
Mass (Da):44,594
Last modified:July 11, 2006 - v1
Checksum:i53F15E1B9DA54374
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000305 Genomic DNA. Translation: ABG17707.1.
ACNQ01000008 Genomic DNA. Translation: EEO77831.1.
RefSeqiYP_647307.1. NC_008149.1.

Genome annotation databases

EnsemblBacteriaiABG17707; ABG17707; YPN_1377.
EEO77831; EEO77831; YP516_1518.
GeneIDi4126166.
KEGGiypn:YPN_1377.
PATRICi18602081. VBIYerPes46733_1707.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000305 Genomic DNA. Translation: ABG17707.1.
ACNQ01000008 Genomic DNA. Translation: EEO77831.1.
RefSeqiYP_647307.1. NC_008149.1.

3D structure databases

ProteinModelPortaliQ1CJX3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi377628.YPN_1377.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG17707; ABG17707; YPN_1377.
EEO77831; EEO77831; YP516_1518.
GeneIDi4126166.
KEGGiypn:YPN_1377.
PATRICi18602081. VBIYerPes46733_1707.

Phylogenomic databases

eggNOGiCOG1168.
HOGENOMiHOG000223048.
KOiK14155.
OMAiTKPEGSF.
OrthoDBiEOG6D8BBF.

Enzyme and pathway databases

BioCyciYPES377628:GIXK-1429-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
    Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
    J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nepal516Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Nepal516Imported.
  3. "Yersinia pestis Nepal516A whole genome shotgun sequencing project."
    Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
    Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nepal516Imported.

Entry informationi

Entry nameiQ1CJX3_YERPN
AccessioniPrimary (citable) accession number: Q1CJX3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: January 7, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.