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Q1CIY0 (Q1CIY0_YERPN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative toxin transport protein EMBL EEO77177.1
Submitted name:
Toxin transport protein EMBL ABG18050.1
Gene names
Ordered Locus Names:YPN_1721 EMBL ABG18050.1
ORF Names:YP516_1912 EMBL EEO77177.1
OrganismYersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP] EMBL ABG18050.1
Taxonomic identifier377628 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia ›

Protein attributes

Sequence length712 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Sequences

Sequence LengthMass (Da)Tools
Q1CIY0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 771BBE524BCB99FE

FASTA71278,204
        10         20         30         40         50         60 
MTESYSTLAA EGTKVIQPLE ALACAATCFD LTIEASQLAH QLGLAPDEID SIALCRCAAW 

        70         80         90        100        110        120 
IGLRARKVNQ SFERVGKLVL PVLFSDGAQW YVLLSLTAQE ATVYFAGSDQ TRKISPEVLA 

       130        140        150        160        170        180 
KLWRNEVILL AKAEPITAKK QFFGFSWFIP VVMKSRHQLR NIILISLLLQ AILLVTPMLF 

       190        200        210        220        230        240 
ETVIDKVLVS RGVDSLVVLG GAMVALAITE PGYTLLRSWL FAHLSSRVGA ELNTQLYRHL 

       250        260        270        280        290        300 
LGLPLGYFTG QQTGQTIAKM REMEQIRSFL TGSALTMVLD LFFVVTFIAV MFRYSGQLTG 

       310        320        330        340        350        360 
IVLISLLCYL LFWSAVGGRL RKRVAQQYET SAQATSFLTE AVSGGETIKT SATESQFNRR 

       370        380        390        400        410        420 
WRQVLARYVR ASFGSSQAGN LAGQGISLIN KITSAILLWF GVTLVLAGKL SPGELVAFNM 

       430        440        450        460        470        480 
FAGYVTQPIL RLAQAWQDFQ HTQIALERIG TILDSPTEPG SAGLVANCKR AGSLSFKQVR 

       490        500        510        520        530        540 
FRYRPDTAEV LQNLNLEIAG GEFIGITGPS GCGKSTLTKL MQRLYTPQHG QILVDGQDLA 

       550        560        570        580        590        600 
ITDPTTLRRQ MSVVLQESVL FSGSIRDNIC QCRPNADEAH VIHIARLAGA HDFIIALPQG 

       610        620        630        640        650        660 
YQTQVGEKGG LLSGGQCQRI ALARALMADP KILILDEATS ALDYESEAAI MRQLPEITRN 

       670        680        690        700        710 
RTVICIAHRL NTLRQCHRIL LLKDGQIAEQ GSHEVLVASG GNYARLWQQQ TE

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL ABG18050.1.
[2]"Complete sequence of chromosome of Yersinia pestis Nepal516."
US DOE Joint Genome Institute
Barry K., Lucas S., Lapidus A., Copeland A., Detter J.C., Glavina del Rio T., Hammon N., Dalin E., Tice H., Pitluck S., Chain P., Hu P., Malfatti S.A., Radnedge L., Vergez L.M., Larimer F., Land M., Hauser L. expand/collapse author list , Worsham P., Chu M.C., Andersen G., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Nepal516 EMBL ABG18050.1.
[3]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516.
[4]"Yersinia pestis Nepal516A whole genome shotgun sequencing project."
Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nepal516 EMBL EEO77177.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000305 Genomic DNA. Translation: ABG18050.1.
ACNQ01000009 Genomic DNA. Translation: EEO77177.1.
RefSeqYP_647650.1. NC_008149.1.

3D structure databases

SMRQ1CIY0. Positions 472-712.
ModBaseSearch...

Protein-protein interaction databases

STRING377628.YPN_1721.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG18050; ABG18050; YPN_1721.
EEO77177; EEO77177; YP516_1912.
GeneID4123197.
KEGGypn:YPN_1721.
PATRIC18602868. VBIYerPes46733_2095.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2274.
KOK12531.
OMARCANWIG.
ProtClustDBCLSK874380.

Family and domain databases

InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR017940. ABC_transporter_type1.
IPR001140. ABC_transptr_TM_dom.
IPR011527. ABC_transptrTM_dom_typ1.
IPR010132. ATPase_T1SS_HlyB.
IPR005074. Peptidase_C39.
[Graphical view]
PfamPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
PF03412. Peptidase_C39. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF90123. ABC_TM_1. 1 hit.
TIGRFAMsTIGR01846. type_I_sec_HlyB. 1 hit.
PROSITEPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS50990. PEPTIDASE_C39. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1CIY0_YERPN
AccessionPrimary (citable) accession number: Q1CIY0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 1, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info