Q1CH04 (Q1CH04_YERPN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-galactosidase EMBL ABG18726.1
EC=3.2.1.22 EMBL EEO76489.1

Gene names

Ordered Locus Names:	YPN_2398
ORF Names:	YP516_2698 EMBL EEO76489.1

Organism

Yersinia pestis bv. Antiqua (strain Nepal516) [Complete proteome] [HAMAP]

Taxonomic identifier

377628 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	708 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL EEO76489.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	raffinose alpha-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1CH04 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 65B37F41CFBB74D2	FASTA	708	80,449
	10 20 30 40 50 60 MNTTFVRLSS RSSDMIVRCS PYAEIVYWGK PLLDYSPAMM EALNRPVANS RLDSDIPLTL 70 80 90 100 110 120 CPENGRGLFS VPGMEGNRDG EDWSPIFTSQ SHTLENNLLT IISEDTSAGL RLVSELQMCP 130 140 150 160 170 180 DSGVIKTRNT LTNIKAGCYR IDRLAVTLPF PERANEIMAF NGRWIKEFQR HSLKLDHGGY 190 200 210 220 230 240 IQENRRGRTS HEYFPGMVVG KAGFSEQQGE VWGLHLAWSG NHRLRADCKS DGRRQVQAEA 250 260 270 280 290 300 LYFSGEIVLE HLQSVSTPWV YATYSATGLN GMSHSFHHYV RQNIVPSLAE KPRPVHLNTW 310 320 330 340 350 360 EGIYFKHDPD YIIQMVKNAA KIGVERFIID DGWFKGRNND LSSLGDWYID AEKYPQGLNP 370 380 390 400 410 420 IIEAVNEYGM EFGIWVEPEM INQDSDLYRN HPDWVLKLDG YPLLKGRDQL LLDLSNPAVF 430 440 450 460 470 480 DYLLERLSWL LGEHKVDYVK WDFNREMVQP GHRGHPSLVQ QTEQLYRLFD QLNLHFPHIE 490 500 510 520 530 540 FESCASGGGR IDYEILQRCH RFWPSDSNDA LDRQQIQRGM SYFFPPEVMG AHIGGTPCHT 550 560 570 580 590 600 TARMHSINFR GLTALFGHMG VELDPVSESP AEQQAFARYI ALHKQLRPLL HSGNTIRLDH 610 620 630 640 650 660 PDKTTLINAV IAHDQQQAVV LISQLALPEY ALCGNVLIPG LNPSTHYQIE VLDMPDSMHK 670 680 690 700 PRNNTMKRYP AWLKSPLIVS GDWLEKAGIA LPILNPESAI LIQLSAVN

References

[1]

"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen." Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L. J. Bacteriol. 188:4453-4463(2006) [PubMed: 16740952] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516.

[2]

"Yersinia pestis Nepal516A whole genome shotgun sequencing project." Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S. Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nepal516 EMBL EEO76489.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000305 Genomic DNA. Translation: ABG18726.1. ACNQ01000013 Genomic DNA. Translation: EEO76489.1.
PIR	AH0192.
RefSeq	YP_648326.1. NC_008149.1.
3D structure databases
ProteinModelPortal	Q1CH04.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1CH04.
Protein family/group databases
CAZy	GH36. Glycoside Hydrolase Family 36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4123475.
GenomeReviews	Gene locus YPN_2398 in contig CP000305_GR.
KEGG	ypn:YPN_2398.
PATRIC	18604438. VBIYerPes46733_2872.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3345.
HOGENOM	HBG299823.
OMA	TPWLYAS.
ProtClustDB	CLSK888896.
Enzyme and pathway databases
BioCyc	YPES377628:YPN_2398-MONOMER.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002252. Glyco_hydro_36. IPR000111. Glyco_hydro_GHD. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K07407.
Pfam	PF02065. Melibiase. 1 hit. [Graphical view]
PIRSF	PIRSF005536. Agal. 1 hit.
PRINTS	PR00743. GLHYDRLASE36.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00512. ALPHA_GALACTOSIDASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1CH04_YERPN

Accession

Primary (citable) accession number: Q1CH04

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)