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Q1CDL6

- GLGA_YERPN

UniProt

Q1CDL6 - GLGA_YERPN

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Protein

Glycogen synthase

Gene
glgA, YPN_3587, YP516_4076
Organism
Yersinia pestis bv. Antiqua (strain Nepal516)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucose By similarity

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciYPES377628:GIXK-3686-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene namesi
Name:glgA
Ordered Locus Names:YPN_3587
ORF Names:YP516_4076
OrganismiYersinia pestis bv. Antiqua (strain Nepal516)
Taxonomic identifieri377628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000008936: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 476476Glycogen synthaseUniRule annotationPRO_1000014394Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi377628.YPN_3587.

Structurei

3D structure databases

ProteinModelPortaliQ1CDL6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPYHDESQ.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1CDL6-1 [UniParc]FASTAAdd to Basket

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MRVLHVCSEL FPLLKTGGLA DVIGALPAAQ LAEGADVRII LPAFPDLRRG    50
IPETVLVREI DTFAGRVALR YGHYRGIGIY LIDAPALYDR AGSPYHDASL 100
YAYSDNYLRF ALLGWMACEL ACGLDGYWRP EVVHAHDWHA GLTCAYLAAR 150
GRPARSVFTV HNLAYQGLFS ADHLSELHLP AEFFQIYGLE FYGQISYLKA 200
GLFFADHVTT VSPTYAKEIT QPAFGYGMEG LLQALARQGR LTGILNGVDS 250
DIWDPQSDTL LPTRYDAENL QAKAINKTHL QTAMGLQLAE NKPIFAVVSR 300
LTVQKGLDLV LEALPELLAL GGQLVVLGSG DATLQEAFLA AAAEHSGQVG 350
VQIGYHEAFS HRIIAGSDVI LVPSRFEPCG LTQLYGLKYG TLPLVRHTGG 400
LADTVVDCAL ENLADGSASG FVFNECEAQA LVKAIRRAFV LWSRPKHWRH 450
VQRHAMRLDF GWQLAAVDYL SLYRRL 476
Length:476
Mass (Da):52,276
Last modified:July 11, 2006 - v1
Checksum:iA057EA3FEC5B6800
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG19914.1.
ACNQ01000019 Genomic DNA. Translation: EEO74479.1.
RefSeqiYP_649514.1. NC_008149.1.

Genome annotation databases

EnsemblBacteriaiABG19914; ABG19914; YPN_3587.
EEO74479; EEO74479; YP516_4076.
GeneIDi4124592.
KEGGiypn:YPN_3587.
PATRICi18607229. VBIYerPes46733_4244.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000305 Genomic DNA. Translation: ABG19914.1 .
ACNQ01000019 Genomic DNA. Translation: EEO74479.1 .
RefSeqi YP_649514.1. NC_008149.1.

3D structure databases

ProteinModelPortali Q1CDL6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 377628.YPN_3587.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG19914 ; ABG19914 ; YPN_3587 .
EEO74479 ; EEO74479 ; YP516_4076 .
GeneIDi 4124592.
KEGGi ypn:YPN_3587.
PATRICi 18607229. VBIYerPes46733_4244.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294941.
KOi K00703.
OMAi PYHDESQ.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci YPES377628:GIXK-3686-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
    Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
    J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nepal516.
  2. "Yersinia pestis Nepal516A whole genome shotgun sequencing project."
    Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L., Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.
    Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGLGA_YERPN
AccessioniPrimary (citable) accession number: Q1CDL6
Secondary accession number(s): D1Q1S6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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