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Q1CBK6

- GLPB_YERPA

UniProt

Q1CBK6 - GLPB_YERPA

Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Yersinia pestis bv. Antiqua (strain Antiqua)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

    Cofactori

    FMN.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Flavoprotein, FMN

    Enzyme and pathway databases

    BioCyciYPES360102:GHZU-216-MONOMER.
    UniPathwayiUPA00618; UER00673.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
    Short name:
    Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
    Short name:
    Anaerobic G3Pdhase BUniRule annotation
    Gene namesi
    Name:glpBUniRule annotation
    Ordered Locus Names:YPA_0197
    OrganismiYersinia pestis bv. Antiqua (strain Antiqua)
    Taxonomic identifieri360102 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000001971: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 424424Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_0000258911Add
    BLAST

    Interactioni

    Subunit structurei

    Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

    Protein-protein interaction databases

    STRINGi360102.YPA_0197.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1CBK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3075.
    HOGENOMiHOG000278489.
    KOiK00112.
    OMAiFRSVNIS.
    OrthoDBiEOG6K6V62.

    Family and domain databases

    HAMAPiMF_00753. Glycerol3P_GlpB.
    InterProiIPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1CBK6-1 [UniParc]FASTAAdd to Basket

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    MKFDVIIIGG GLAGLACGIR LAEQGKYCAI VSSGQNALHF SSGSLDLLAK    50
    LPDGQAVSQP LSALSALAEL APEHPYSKMR NITQLDELVQ EAEALLRRCG 100
    LDIVGSSAEN HLRLTPLGSC RPTWLSLADI PVAPLNGPLP WQRVAVIGIE 150
    GFLDFQPQMV ASALQDQGID ATADYLHLPA LDRLRDNPSE FRAVNIARIL 200
    DLPENRQPLA DELSRLSSTA EMILLPACIG LDKSAPLDAL RAVVGKPIQL 250
    LPTLPPSLLG MRLHQALRHR FQQLGGLVMP GDAVLRAELV DNRITGLYSR 300
    NHGDIPLRAA QMVLASGSFF SNGLVATFDK IYEPILDLDI LSLPHRADWS 350
    HSNLFAPQPY LQFGVNTDNH LRPLRGGVAL ENLHAIGAVL GGYDPLQQGC 400
    GAGVSLTSAV FVAEQIISEM AVTL 424
    Length:424
    Mass (Da):45,506
    Last modified:July 11, 2006 - v1
    Checksum:iCEC65C3081A809E7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000308 Genomic DNA. Translation: ABG12166.1.
    RefSeqiYP_650111.1. NC_008150.1.

    Genome annotation databases

    EnsemblBacteriaiABG12166; ABG12166; YPA_0197.
    GeneIDi4122126.
    KEGGiypa:YPA_0197.
    PATRICi18579231. VBIYerPes1796_0458.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000308 Genomic DNA. Translation: ABG12166.1 .
    RefSeqi YP_650111.1. NC_008150.1.

    3D structure databases

    ProteinModelPortali Q1CBK6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 360102.YPA_0197.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG12166 ; ABG12166 ; YPA_0197 .
    GeneIDi 4122126.
    KEGGi ypa:YPA_0197.
    PATRICi 18579231. VBIYerPes1796_0458.

    Phylogenomic databases

    eggNOGi COG3075.
    HOGENOMi HOG000278489.
    KOi K00112.
    OMAi FRSVNIS.
    OrthoDBi EOG6K6V62.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00673 .
    BioCyci YPES360102:GHZU-216-MONOMER.

    Family and domain databases

    HAMAPi MF_00753. Glycerol3P_GlpB.
    InterProi IPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
      Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
      J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Antiqua.

    Entry informationi

    Entry nameiGLPB_YERPA
    AccessioniPrimary (citable) accession number: Q1CBK6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3