Q1C3N4 (Q1C3N4_YERPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABG14938.1

Gene names

Ordered Locus Names:

YPA_2976

Organism

Yersinia pestis bv. Antiqua (strain Antiqua) [Complete proteome] [HAMAP] EMBL ABG14938.1

Taxonomic identifier

360102 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	672 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alginic acid catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1C3N4 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 28FC10E2B9BC084D	FASTA	672	77,215
	10 20 30 40 50 60 MKQFTDRQMV KIRQRVVKQP EIIATLIADN QVVLETDTLV PATGIATWNH YYYCPEHGVQ 70 80 90 100 110 120 LVWDRFSPQA HRCPVDDHLF SGEPYDGAWW RALNGLNAKA CNQLGLLWQL TGEIRYFDKV 130 140 150 160 170 180 RDILMSYARY YPDYEVHGGI PYNGPGKANA QTLCEANCLL DFALGYDFIA DTLSQEQRDC 190 200 210 220 230 240 LAERLLRVGA DFLMQHRTRQ LHNHEVKISS AIAVIGLILE EEHYIEFAVN ADYGLRYQLE 250 260 270 280 290 300 HGLFNEGLWF EGSVHYHFYA LQGFWSFEKL AAGSRYSLLA LPYYRDMLSF PLKLLMPNGT 310 320 330 340 350 360 FPRINDCTAG QEQLNHAHLY EFAYQIYGNR EYAAALQHIY RQQPRLNLDA LLYGAESLPL 370 380 390 400 410 420 QIIDVIPTDT LHAPDCGLTI LRQPQASRAL LIKHSPYGGE HDHYDRLNLI LFDRGHEVLP 430 440 450 460 470 480 DLGTTGYGAQ RHYDYYKNSA THNTLSINQK NQPPAVPYIR QWHQAANFSW LDTEVDWRQT 490 500 510 520 530 540 APELDSHTRV QWDEASYRDV KFRRRILWLE DTIIDISNIV NPHQQSWNWT LYIDGTATEQ 550 560 570 580 590 600 KGEMTSFGDS GPMQYVHQVT AQPLNGVMSC RYQTTARPLT LWLAADATLF QGLAPANPSV 610 620 630 640 650 660 RDLSYLMLRN QQPAAQVTCV FDLNDSNPLL HVEVETNGEI LSIELIRQQQ TMRINIPLTS 670 NQLPQFSQAY PS

References

[1]

"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen." Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L. J. Bacteriol. 188:4453-4463(2006) [PubMed: 16740952] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000308 Genomic DNA. Translation: ABG14938.1.
RefSeq	YP_652883.1. NC_008150.1.
3D structure databases
ProteinModelPortal	Q1C3N4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1C3N4.
Protein family/group databases
CAZy	PL17. Polysaccharide Lyase Family 17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4119363.
GenomeReviews	Gene locus YPA_2976 in contig CP000308_GR.
KEGG	ypa:YPA_2976.
PATRIC	18585737. VBIYerPes1796_3665.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG45022.
HOGENOM	HBG757299.
OMA	ATESNAY.
ProtClustDB	CLSK889500.
Enzyme and pathway databases
BioCyc	YPES360102:YPA_2976-MONOMER.
Family and domain databases
InterPro	IPR008397. Alginate_lyase_dom. IPR008929. Chondroitin_lyas. IPR012480. Hepar_II_III. [Graphical view]
Gene3D	G3DSA:1.50.10.110. Alginate_lyase. 1 hit.
Pfam	PF05426. Alginate_lyase. 1 hit. PF07940. Hepar_II_III. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1C3N4_YERPA

Accession

Primary (citable) accession number: Q1C3N4

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)