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Q1C0D5

- XYLG_YERPA

UniProt

Q1C0D5 - XYLG_YERPA

Protein

Xylose import ATP-binding protein XylG

Gene

xylG

Organism
Yersinia pestis bv. Antiqua (strain Antiqua)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system.UniRule annotation

    Catalytic activityi

    ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi37 – 448ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. D-xylose-importing ATPase activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Sugar transport, Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciYPES360102:GHZU-4222-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose import ATP-binding protein XylGUniRule annotation (EC:3.6.3.17UniRule annotation)
    Gene namesi
    Name:xylGUniRule annotation
    Ordered Locus Names:YPA_4126
    OrganismiYersinia pestis bv. Antiqua (strain Antiqua)
    Taxonomic identifieri360102 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000001971: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. ATP-binding cassette (ABC) transporter complex Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 510510Xylose import ATP-binding protein XylGPRO_0000271519Add
    BLAST

    Interactioni

    Subunit structurei

    The complex is composed of two ATP-binding proteins (XylG), two transmembrane proteins (XylH) and a solute-binding protein (XylF).UniRule annotation

    Protein-protein interaction databases

    STRINGi360102.YPA_4126.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1C0D5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini5 – 242238ABC transporter 1UniRule annotationAdd
    BLAST
    Domaini259 – 505247ABC transporter 2UniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. [View classification]UniRule annotation
    Contains 2 ABC transporter domains.UniRule annotation

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiCOG1129.
    KOiK10545.
    OMAiMPRELIG.
    OrthoDBiEOG6QK4RR.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR013455. ABC_transptr_xylose_ATP-bd.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00005. ABC_tran. 2 hits.
    [Graphical view]
    SMARTiSM00382. AAA. 2 hits.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 2 hits.
    TIGRFAMsiTIGR02633. xylG. 1 hit.
    PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 2 hits.
    PS51280. XYLG. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1C0D5-1 [UniParc]FASTAAdd to Basket

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    MPYLLEMKDI TKQFGVVKAV DNISLTLEAG QVLSLCGENG SGKSTLMKVL    50
    CGIYPVGSYQ GEIIFSGETL QAKNIRETEQ KGIAIIHQEL ALVKQMSVLE 100
    NMFLGSEWGR FGIMDYDAMY LRCQRMLAQV KLVVDPHTPV SELGLGQQQL 150
    VEIAKALNKQ VRLLVLDEPT ASLTESETAI LLDIIRDLRN HGIACIYISH 200
    KLNEVKEISD HICVIRDGRH IGTRPASTMS EDDIIAMMVG RELKELYPHE 250
    AHHIGEEILR VENLCAWHPV NRHIRRVDDV SFSLKRGEIL GIAGLVGSGR 300
    TETVQCLFGV YPGRWQGDIF IKGQAATIRT CQQAMKLGIA MVPEDRKKDG 350
    IVPVMGVGAN ITLAALDDFT GAFSLLDDAK EQSIIVQSLA RLKVKTSSSE 400
    LAIARLSGGN QQKAILAKCL LLNPQILILD EPTRGIDIGA KYEIYKLINQ 450
    LVQQGIAVIV ISSELPEVLG LSDRVLVMHQ GRIKADLINH NLTQEKVMEA 500
    ALRSETHVTS 510
    Length:510
    Mass (Da):56,249
    Last modified:July 11, 2006 - v1
    Checksum:i0CA4A44A426A27E0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000308 Genomic DNA. Translation: ABG16087.1.
    RefSeqiYP_654032.1. NC_008150.1.

    Genome annotation databases

    EnsemblBacteriaiABG16087; ABG16087; YPA_4126.
    GeneIDi4118356.
    KEGGiypa:YPA_4126.
    PATRICi18588387. VBIYerPes1796_4966.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000308 Genomic DNA. Translation: ABG16087.1 .
    RefSeqi YP_654032.1. NC_008150.1.

    3D structure databases

    ProteinModelPortali Q1C0D5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 360102.YPA_4126.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG16087 ; ABG16087 ; YPA_4126 .
    GeneIDi 4118356.
    KEGGi ypa:YPA_4126.
    PATRICi 18588387. VBIYerPes1796_4966.

    Phylogenomic databases

    eggNOGi COG1129.
    KOi K10545.
    OMAi MPRELIG.
    OrthoDBi EOG6QK4RR.

    Enzyme and pathway databases

    BioCyci YPES360102:GHZU-4222-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR013455. ABC_transptr_xylose_ATP-bd.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00005. ABC_tran. 2 hits.
    [Graphical view ]
    SMARTi SM00382. AAA. 2 hits.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 2 hits.
    TIGRFAMsi TIGR02633. xylG. 1 hit.
    PROSITEi PS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 2 hits.
    PS51280. XYLG. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
      Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
      J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Antiqua.

    Entry informationi

    Entry nameiXYLG_YERPA
    AccessioniPrimary (citable) accession number: Q1C0D5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 9, 2007
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3