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Q1C0D5 (XYLG_YERPA) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Xylose import ATP-binding protein XylG

EC=3.6.3.17
Gene names
Name:xylG
Ordered Locus Names:YPA_4126
OrganismYersinia pestis bv. Antiqua (strain Antiqua) [Complete proteome] [HAMAP]
Taxonomic identifier360102 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length510 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system By similarity.

Catalytic activity

ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).

Subunit structure

The complex is composed of two ATP-binding proteins (XylG), two transmembrane proteins (XylH) and a solute-binding protein (XylF) Potential.

Subcellular location

Cell inner membrane; Peripheral membrane protein By similarity.

Sequence similarities

Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. [View classification]

Contains 2 ABC transporter domains.

Ontologies

Keywords
   Biological processSugar transport
Transport
   Cellular componentCell inner membrane
Cell membrane
Membrane
   DomainRepeat
   LigandATP-binding
Nucleotide-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentATP-binding cassette (ABC) transporter complex

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

D-xylose-importing ATPase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 510510Xylose import ATP-binding protein XylG
PRO_0000271519

Regions

Domain5 – 242238ABC transporter 1
Domain259 – 505247ABC transporter 2
Nucleotide binding37 – 448ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q1C0D5 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 0CA4A44A426A27E0

FASTA51056,249
        10         20         30         40         50         60 
MPYLLEMKDI TKQFGVVKAV DNISLTLEAG QVLSLCGENG SGKSTLMKVL CGIYPVGSYQ 

        70         80         90        100        110        120 
GEIIFSGETL QAKNIRETEQ KGIAIIHQEL ALVKQMSVLE NMFLGSEWGR FGIMDYDAMY 

       130        140        150        160        170        180 
LRCQRMLAQV KLVVDPHTPV SELGLGQQQL VEIAKALNKQ VRLLVLDEPT ASLTESETAI 

       190        200        210        220        230        240 
LLDIIRDLRN HGIACIYISH KLNEVKEISD HICVIRDGRH IGTRPASTMS EDDIIAMMVG 

       250        260        270        280        290        300 
RELKELYPHE AHHIGEEILR VENLCAWHPV NRHIRRVDDV SFSLKRGEIL GIAGLVGSGR 

       310        320        330        340        350        360 
TETVQCLFGV YPGRWQGDIF IKGQAATIRT CQQAMKLGIA MVPEDRKKDG IVPVMGVGAN 

       370        380        390        400        410        420 
ITLAALDDFT GAFSLLDDAK EQSIIVQSLA RLKVKTSSSE LAIARLSGGN QQKAILAKCL 

       430        440        450        460        470        480 
LLNPQILILD EPTRGIDIGA KYEIYKLINQ LVQQGIAVIV ISSELPEVLG LSDRVLVMHQ 

       490        500        510 
GRIKADLINH NLTQEKVMEA ALRSETHVTS 

« Hide

References

[1]"Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen."
Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M., Worsham P., Chu M.C., Andersen G.L.
J. Bacteriol. 188:4453-4463(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Antiqua.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000308 Genomic DNA. Translation: ABG16087.1.
RefSeqYP_654032.1. NC_008150.1.

3D structure databases

ProteinModelPortalQ1C0D5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360102.YPA_4126.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG16087; ABG16087; YPA_4126.
GeneID4118356.
KEGGypa:YPA_4126.
PATRIC18588387. VBIYerPes1796_4966.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1129.
KOK10545.
OMAMPRELIG.
OrthoDBEOG6QK4RR.

Enzyme and pathway databases

BioCycYPES360102:GHZU-4222-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR013455. ABC_transptr_xylose_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR02633. xylG. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
PS51280. XYLG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameXYLG_YERPA
AccessionPrimary (citable) accession number: Q1C0D5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: July 11, 2006
Last modified: July 9, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families