Q1BYZ4 (Q1BYZ4_BURCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABF75161.1

Gene names

Ordered Locus Names:

Bcen_0247

Organism

Burkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP]

Taxonomic identifier

331271 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1
Sequence similarities	Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	43	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	Q1BYZ4 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 69B08E1233DDD936	FASTA	239	25,502
	10 20 30 40 50 60 MPAFVPVMSD LAARLASVHR RIADAARAAG RDPAAVSLLA VSKTFPADDV RAAHAAGQRA 70 80 90 100 110 120 FGENYVQESI DKIDALADLR ASLEWHFIGP LQSNKTRPVA ERFDWVHSVD RLKIAQRLSE 130 140 150 160 170 180 QRPAHLPPLN VCVQVNISGE ASKSGVAPAD VAEVARAVAA LPSLRLRGLM AIPEPADDTD 190 200 210 220 230 AQRAPHRALR ALFDTLRADG LPLDTLSMGM SADLDAAVLE GATIVRVGTA IFGARDYAH

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cenocepacia AU 1054." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AU 1054.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000378 Genomic DNA. Translation: ABF75161.1.
RefSeq	YP_620134.1. NC_008060.1.
3D structure databases
ProteinModelPortal	Q1BYZ4.
SMR	Q1BYZ4. Positions 10-234.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1BYZ4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4090854.
GenomeReviews	Gene locus Bcen_0247 in contig CP000378_GR.
KEGG	bcn:Bcen_0247.
PATRIC	19043943. VBIBurCen11237_0255.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0325.
HOGENOM	HBG289671.
OMA	AENREQE.
PhylomeDB	Q1BYZ4.
ProtClustDB	CLSK942070.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1BYZ4_BURCA

Accession

Primary (citable) accession number: Q1BYZ4

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)