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Q1BVW7

- GLGB_BURCA

UniProt

Q1BVW7 - GLGB_BURCA

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Burkholderia cenocepacia (strain AU 1054)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (11 Jul 2006)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei415 – 4151NucleophileUniRule annotation
    Active sitei470 – 4701Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciBCEN331271:GHKX-1367-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:Bcen_1332
    OrganismiBurkholderia cenocepacia (strain AU 1054)
    Taxonomic identifieri331271 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000002400: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7367361,4-alpha-glucan branching enzyme GlgBPRO_0000260637Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi331271.Bcen_1332.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1BVW7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiAKLLFMG.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1BVW7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTDTLFDRAD IDALLAGRHP DPFACLGPHR HDDQIVVRAL LPGAERVRAL    50
    SPDGAELGTL ACVDRAGCFA GTIAHDGGAP HYLLSIDWPD AHQVTDDAYA 100
    FGTLLDEAAL ARFSAGDPEA VLDCLGATPV RIDDTDGVRF AVWAPSAQRV 150
    SVVGDFNAWD GRRHPMRLRR PSGVWELFVP GIGAGERYKY ELCAADGRVL 200
    PHKADPCARA TEAPPRTASV VADVAALHAF AWHDDGWMHA RPRHDDRYRV 250
    PWSIYEVHPE SWQRIPEQMD RSATWDELAE RLIPYVKGMG FTHVEFMPIA 300
    EYPFGGSWGY QPLAQFAPSA RFGPVEGFAR FVDRAHAAGI GVLVDWVPAH 350
    FPNDAHGLAQ FDGSALYEHA DPREGMHPDW NTCVFNVGRT EVSAFLVASA 400
    LAWARRYHVD GIRVDAVASM LYRDYSRKEG EWVPNVYGGR ENLESVAFLR 450
    RLNDTLHGDA APAGVVTVAE ESTAWPGVTA PTADGGLGFD FKWNMGWMHD 500
    TLAYLHEDPI HRRYHHDRMT FGLVYAFSER FVLPLSHDEV VHGKGSLVAK 550
    MPGDAWQRLA TLRAYFGFMW AHPGKKLLFM GSEFAQWSEF AHDATPHWDL 600
    LDAPAHRGVQ RLVRDLNRAY AAEPALHALD CHAAGFAWLI GDDRDNSVFA 650
    FARRDDTGRL VVAVCNFTPV PRAGYRLGLP APGHWRELMN TDAASYGGAN 700
    AGNDGAVWAE AVPAHGEAWS ASLRLPPLAT LWLTPA 736
    Length:736
    Mass (Da):81,221
    Last modified:July 11, 2006 - v1
    Checksum:iB67DAC25AEC4A7D0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000378 Genomic DNA. Translation: ABF76238.1.
    RefSeqiWP_011545538.1. NC_008060.1.
    YP_621211.1. NC_008060.1.

    Genome annotation databases

    EnsemblBacteriaiABF76238; ABF76238; Bcen_1332.
    GeneIDi4091427.
    KEGGibcn:Bcen_1332.
    PATRICi19046233. VBIBurCen11237_1372.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000378 Genomic DNA. Translation: ABF76238.1 .
    RefSeqi WP_011545538.1. NC_008060.1.
    YP_621211.1. NC_008060.1.

    3D structure databases

    ProteinModelPortali Q1BVW7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 331271.Bcen_1332.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABF76238 ; ABF76238 ; Bcen_1332 .
    GeneIDi 4091427.
    KEGGi bcn:Bcen_1332.
    PATRICi 19046233. VBIBurCen11237_1372.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi AKLLFMG.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci BCEN331271:GHKX-1367-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AU 1054.

    Entry informationi

    Entry nameiGLGB_BURCA
    AccessioniPrimary (citable) accession number: Q1BVW7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: July 11, 2006
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3