Q1BU88 (Q1BU88_BURCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003887
EC=5.4.99.- RuleBase RU003887

Gene names

Ordered Locus Names:

Bcen_1914

Organism

Burkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF76817.1

Taxonomic identifier

331271 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia cenocepacia

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rsuA family. RuleBase RU003887

Ontologies

Keywords
Molecular function	Isomerase SAAS SAAS000748 RuleBase RU003887
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1BU88 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: FB6C815C4EDA1CA5	FASTA	192	20,856
	10 20 30 40 50 60 MNLIALNKPF GTICQFSAHE TRPSLGDWVK TPGVYAAGRL DADSEGLLLL TDDGGLQARI 70 80 90 100 110 120 AEPRHKLVKR YWAQVDGAPG PADLKALARG VDLGDYVTRP CRAEFIEPPD TLWPRNPPIR 130 140 150 160 170 180 YRAAIPTTWI ELAITEGKNR QVRRMTAAVG FPTLRLVRVG IGALDIFALG IAPGETIALP 190 PRAPWDGFAP VG

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cenocepacia AU 1054." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AU 1054.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000378 Genomic DNA. Translation: ABF76817.1.
RefSeq	YP_621790.1. NC_008060.1.
3D structure databases
ProteinModelPortal	Q1BU88.
ModBase	Search...
Protein-protein interaction databases
STRING	331271.Bcen_1914.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF76817; ABF76817; Bcen_1914.
GeneID	4091656.
KEGG	bcn:Bcen_1914.
PATRIC	19047498. VBIBurCen11237_1994.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044955.
KO	K06181.
OMA	TWIELSI.
ProtClustDB	CLSK930450.
Enzyme and pathway databases
BioCyc	BCEN331271:GHKX-5562-MONOMER.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR000748. PsdUridine_synth_RsuA/RluB/E/F. IPR018496. PsdUridine_synth_RsuA/RluB_CS. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00093. TIGR00093. 1 hit.
PROSITE	PS01149. PSI_RSU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1BU88_BURCA

Accession

Primary (citable) accession number: Q1BU88

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)