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Q1BRK9 (Q1BRK9_BURCA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bcen_2849 EMBL ABF77746.1
OrganismBurkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF77746.1
Taxonomic identifier331271 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABF77746.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABF77746.1
Chain26 – 659634 Potential EMBL ABF77746.1
PRO_5000123188

Sequences

Sequence LengthMass (Da)Tools
Q1BRK9 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 1705C38572EC4F12

FASTA65967,940
        10         20         30         40         50         60 
MLHNWSIRTT LTAVGLILVC LAAAVGGLGL YALNHASRSL DEIAHVDLPA IHTLDDTAAY 

        70         80         90        100        110        120 
LLRSRVALDR FRTLTEAGNA ADAAKVLDRA QELYAKSNQN WQTFQSTPKL GVEQALVDEL 

       130        140        150        160        170        180 
TARYATIMKE GVEPEFAAAR AGDMAAYHAI ADAKISPMFV AFDQTAAAVI AALQKRAEER 

       190        200        210        220        230        240 
QAATQSQISM MIALIAAGIA LAFVVVIAIR FVLRGLIVQP IEDAIAHFER IAGGDLTQPV 

       250        260        270        280        290        300 
SVFSTNEIGR LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REIASGNIDL SQRTEEQAAS 

       310        320        330        340        350        360 
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATQGG DVVGQVVSTM QDIAASSGKV 

       370        380        390        400        410        420 
VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA SAAKEIKQLI 

       430        440        450        460        470        480 
GDSAEKVDSG SALVARAGAT MDEIVQAVRR VTDIMGEISA ASDEQSTGIE QVNRAVGQMD 

       490        500        510        520        530        540 
AVTQQNAALV EQAAAAAASL EEQTRQMKAI VSGWRVAGGI ALAPTRGVAR PVAHEPAALP 

       550        560        570        580        590        600 
SDVRHDAPVA ALPAPAAAQP AARRGAPASR AAAPATAGAG AAAAAAEPKR AADAAARTQK 

       610        620        630        640        650 
DAPAARGGTA AGGYGPRLAK TAAAADKPAA KPALVRPALN GEKPALAAAG ASDDDWETF 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cenocepacia AU 1054."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AU 1054 EMBL ABF77746.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000378 Genomic DNA. Translation: ABF77746.1.
RefSeqYP_622719.1. NC_008060.1.

3D structure databases

ProteinModelPortalQ1BRK9.
SMRQ1BRK9. Positions 293-516.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING331271.Bcen_2849.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF77746; ABF77746; Bcen_2849.
GeneID4090964.
KEGGbcn:Bcen_2849.
PATRIC19049520. VBIBurCen11237_2983.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAAYHAVAD.
OrthoDBEOG6B62H8.

Enzyme and pathway databases

BioCycBCEN331271:GHKX-2915-MONOMER.

Family and domain databases

Gene3D1.20.120.30. 1 hit.
InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47170. SSF47170. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1BRK9_BURCA
AccessionPrimary (citable) accession number: Q1BRK9
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)