Q1BR54 (Q1BR54_BURCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase apoenzyme EMBL ABF77901.1
EC=2.6.1.19 EMBL ABF77901.1

Gene names

Ordered Locus Names:

Bcen_3005

Organism

Burkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF77901.1

Taxonomic identifier

331271 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia cenocepacia

Protein attributes

Sequence length	429 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ABF77901.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1BR54 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: B24002220C71631D	FASTA	429	45,766
	10 20 30 40 50 60 MTVKNADLQA RKNAATPRGV GVMCDFYAAR AENAELWDVE GRRFIDFAAG IAVLNTGHRH 70 80 90 100 110 120 PKIVKAIADQ LNNFTHTAYQ IVPYASYVEL AEKINERAPG DFPKKTAFFT TGAEAVENAI 130 140 150 160 170 180 KIARAATGRP GVIAFSGGFH GRTMMGMALT GKVAPYKLNF GPFPGDVFHA PYPNAVHGVT 190 200 210 220 230 240 TADSIKAIEM LFKADIDPKR VAAIIFEPVQ GEGGFNPAPA EFVRALRKIC NEHGILLIAD 250 260 270 280 290 300 EVQTGFARTG KLFAMQHYDV LADLITMAKS LAGGMPLSGV VGRADVMDAA APGGLGGTYA 310 320 330 340 350 360 GNPLAVASAH AVLEIIDEEK LCERATQLGD VLKAKLNALQ ADVPQIADVR GPGAMIAVEF 370 380 390 400 410 420 LKPGSGEPDA EFTKRVQTRA LERGLLLLVC GVYSNVVRFL FPLTIPQAVF DEALVILEEV LKETVGVPA

References

[1]

"Complete sequence of chromosome 2 of Burkholderia cenocepacia AU 1054." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AU 1054.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000379 Genomic DNA. Translation: ABF77901.1.
RefSeq	YP_622874.1. NC_008061.1.
3D structure databases
ProteinModelPortal	Q1BR54.
SMR	Q1BR54. Positions 4-424.
ModBase	Search...
Protein-protein interaction databases
STRING	331271.Bcen_3005.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF77901; ABF77901; Bcen_3005.
GeneID	4095547.
KEGG	bcn:Bcen_3005.
PATRIC	19049824. VBIBurCen11237_3133.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	VEFNDRT.
ProtClustDB	CLSK930074.
Enzyme and pathway databases
BioCyc	BCEN331271:GHKX-1104-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1BR54_BURCA

Accession

Primary (citable) accession number: Q1BR54

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)