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Q1BNJ0 (Q1BNJ0_BURCA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Bcen_3926 EMBL ABF78815.1
OrganismBurkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF78815.1
Taxonomic identifier331271 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length539 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABF78815.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential EMBL ABF78815.1
Chain29 – 539511 Potential EMBL ABF78815.1
PRO_5000123415

Sequences

Sequence LengthMass (Da)Tools
Q1BNJ0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 6A3F7BD471416B61

FASTA53956,772
        10         20         30         40         50         60 
MSIKTKLLGG FGLLAAVVVI VSGVALKALS DTNAEFSRYM NGINARANLS AQIRTAVDRR 

        70         80         90        100        110        120 
AIAARNLVLV TRPADVEAEL AEVNHAHKDV QDHLAKLKEL MANATDTSDR ARELVADIVR 

       130        140        150        160        170        180 
IEAGYGPVAL RIVGLAQAGK KDDAIADIDD NCRPLLAQLV RATDAYATFT HERELEIAQA 

       190        200        210        220        230        240 
FADRYTAERN LLAGICLIAV AIAACGGLWL TRKITVPIGA AVDVARTVAN GDLGSRIEVR 

       250        260        270        280        290        300 
GNDETRDLLD ALRTMNERLI GIVGRVRDSS NSIAHAVSEI ASGNLDLSQR TEEQAASLQE 

       310        320        330        340        350        360 
TAATMEEFTS TVRLNAENAQ QASTLAANAS DVAHRGSSVV GRVVDTMTEI GHSSSKIADI 

       370        380        390        400        410        420 
TGIIEGIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR NLAQRSSTAA KEIKELITAS 

       430        440        450        460        470        480 
VQTIRDGSAL AGEAGKTMSD VTQAVARVTD IMGEIAAASA EQSRGIDQVN LTITQMDETT 

       490        500        510        520        530 
QQNAALVEQA AAASKSLEAQ GRELSETVAA FRMPSGSHGA SPGALVQETD MRHWQPAAA 

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia cenocepacia AU 1054."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AU 1054 EMBL ABF78815.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000379 Genomic DNA. Translation: ABF78815.1.
RefSeqYP_623788.1. NC_008061.1.

3D structure databases

ProteinModelPortalQ1BNJ0.
SMRQ1BNJ0. Positions 290-513.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING331271.Bcen_3926.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF78815; ABF78815; Bcen_3926.
GeneID4095350.
KEGGbcn:Bcen_3926.
PATRIC19051747. VBIBurCen11237_4084.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05874.
OMATYTHERE.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycBCEN331271:GHKX-4001-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1BNJ0_BURCA
AccessionPrimary (citable) accession number: Q1BNJ0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)