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Q1BIK0 (Q1BIK0_BURCA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bcen_5686 EMBL ABF80555.1
OrganismBurkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF80555.1
Taxonomic identifier331271 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABF80555.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL ABF80555.1
Chain33 – 521489 Potential EMBL ABF80555.1
PRO_5000123763

Sequences

Sequence LengthMass (Da)Tools
Q1BIK0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: F208B291D0FFCA0B

FASTA52155,255
        10         20         30         40         50         60 
MRKQLTIRGG LVATIAGYTM LLVLVVGAGI AALTIGNGSL EAMYRDDTAS LLHLKTSSER 

        70         80         90        100        110        120 
MLVLRERMSD VAQIISAGQP AKEEVAQLHT LLKQSNDELD AYTHLHARDA SEQALFDTLQ 

       130        140        150        160        170        180 
SRRRALLDRV FLKALSQLDG DDAFNFLDTQ RTAPPALFAA YQEAIDALES FQVARQKARY 

       190        200        210        220        230        240 
EAAGINFHRI VWGMGAVAVL ALVVGFVAQR VLAKAIIGPI NLAVDQFEKI AKGDLTGTVV 

       250        260        270        280        290        300 
VPGENEMAYL LNALKRMQDG LVDTVSQVRA STETIVGDVR TIASGNVDLS ARTEQQAVSL 

       310        320        330        340        350        360 
QQAAASVEQL TAAVRQNADN ARDARTYVEG AAGIASRGGE AMQRVVATMS EISTSSTRIS 

       370        380        390        400        410        420 
GIVGVIESIA FQTNILALNA AVEAARAGEQ GRGFAVVATE VRGLAQRCAA AAKEIRDLIG 

       430        440        450        460        470        480 
HSARRVEDGS GLVALAGSAM TELVAAVERV NAIMGETSQA FDEQSSGIEQ VNAAVIQMEQ 

       490        500        510        520 
TMQRNAALVE EAAAAALSLD EQGARLSAAV AQFRLREAAL A 

« Hide

References

[1]"Complete sequence of chromosome 3 of Burkholderia cenocepacia AU 1054."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AU 1054 EMBL ABF80555.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000380 Genomic DNA. Translation: ABF80555.1.
RefSeqYP_625528.1. NC_008062.1.

3D structure databases

ProteinModelPortalQ1BIK0.
SMRQ1BIK0. Positions 292-517.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING331271.Bcen_5686.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF80555; ABF80555; Bcen_5686.
GeneID4097212.
KEGGbcn:Bcen_5686.
PATRIC19055328. VBIBurCen11237_5868.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAKAIIEPI.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK941481.

Enzyme and pathway databases

BioCycBCEN331271:GHKX-5764-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1BIK0_BURCA
AccessionPrimary (citable) accession number: Q1BIK0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: February 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)