Q1BHK2 (Q1BHK2_BURCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ABF80903.1
EC=5.1.1.1 EMBL ABF80903.1

Gene names

Ordered Locus Names:

Bcen_6038

Organism

Burkholderia cenocepacia (strain AU 1054) [Complete proteome] [HAMAP] EMBL ABF80903.1

Taxonomic identifier

331271 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia cenocepacia

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABF80903.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1BHK2 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: D0A42C619DA890F7	FASTA	356	38,103
	10 20 30 40 50 60 MPRPISATIH TAALANNLSV VRRFAGPSKV WAVVKANAYG HGLARAFPGL RGTDGFGLLD 70 80 90 100 110 120 LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTTV HNDEQMRMLE TARLSKPVNV 130 140 150 160 170 180 QLKMNSGMNR LGYVPEKYRA AWERARACPG IGQITLMTHF SDADNERGVA EQLATFERGA 190 200 210 220 230 240 ESIAGARSLA NSAAVLWHPD THFDWVRPGI VLYGASPSGL SSDIADTGLK SAMTLASELI 250 260 270 280 290 300 AVQTIGKGQA IGYGSTFSAQ APMRIGVVAC GYADGYPRVA PEGTPVIVDG IRTRIVGRVS 310 320 330 340 350 MDMITVDLTP CPQAGVGARV ELWGNALPID DVARHCGTIG YELMCAVAAR VPVRAE

References

[1]

"Complete sequence of chromosome 3 of Burkholderia cenocepacia AU 1054." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., Konstantinidis K., Tiedje J.M., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AU 1054.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000380 Genomic DNA. Translation: ABF80903.1.
RefSeq	YP_625876.1. NC_008062.1.
3D structure databases
ProteinModelPortal	Q1BHK2.
ModBase	Search...
Protein-protein interaction databases
STRING	331271.Bcen_6038.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF80903; ABF80903; Bcen_6038.
GeneID	4097089.
KEGG	bcn:Bcen_6038.
PATRIC	19056112. VBIBurCen11237_6241.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031446.
KO	K01775.
OMA	GQWQDIA.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	BCEN331271:GHKX-578-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1BHK2_BURCA

Accession

Primary (citable) accession number: Q1BHK2

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)