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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Mmcs_0908

Organism
Mycobacterium sp. (strain MCS)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMSP164756:GHQ8-914-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Mmcs_0908Imported
OrganismiMycobacterium sp. (strain MCS)Imported
Taxonomic identifieri164756 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000001972 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi164756.Mmcs_0908.

Structurei

3D structure databases

ProteinModelPortaliQ1BDL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1BDL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTAHNQVVT SRPQAAGLPT RAEVLAALSV AIDLGLGQPA EHMLRSALIA
60 70 80 90 100
TRLADRLGLT RAQRDCVYYA TLIMWIGCHA DSHEYARWFG DDIAVRRASY
110 120 130 140 150
LVDWSGLPYQ RFLLANIAHG EPLLQRLRTA TALYADARGN ISRLIHSHCA
160 170 180 190 200
SAAMLAERIG LDDDVRRALG FTFERFDGGG LPEGASGDAI PIEMRVAQFA
210 220 230 240 250
DLLEVHHRGY GVEGAVAMAR NRRGGQFDPA VVDAFVTDPD ALLSTPTAVW
260 270 280 290 300
TTALQQAPDR HTRLDASGLD ALLIALGDFV DLKCPFTAGH SRAVAALAAD
310 320 330 340 350
AATALGLDGE AVALTRRAGH VHDIGRIGVS NQVWSKGSAL STAEFERVRL
360 370 380 390 400
HPYLTERILR QVPGLAQVAA VASNHHERLD GTGYPRGLSA RELTMPDRVL
410 420 430 440 450
AAAVAFQAAC EPRPYRAQMT AGDAARRVQR RVRDGGLDPA AAEALLQAAG
460 470 480 490 500
QPAGPGPRQG ALTAREAEVL CLVAQGATNK EIAARLVISE KTARNHVERT
510 520
YAKIGVSNRV AASLYALEHG LLGRLV
Length:526
Mass (Da):56,313
Last modified:July 11, 2006 - v1
Checksum:i7DC5CC5673359867
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000384 Genomic DNA. Translation: ABG07024.1.
RefSeqiYP_638080.1. NC_008146.1.

Genome annotation databases

EnsemblBacteriaiABG07024; ABG07024; Mmcs_0908.
KEGGimmc:Mmcs_0908.
PATRICi18111939. VBIMycSp106721_0931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000384 Genomic DNA. Translation: ABG07024.1.
RefSeqiYP_638080.1. NC_008146.1.

3D structure databases

ProteinModelPortaliQ1BDL0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi164756.Mmcs_0908.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG07024; ABG07024; Mmcs_0908.
KEGGimmc:Mmcs_0908.
PATRICi18111939. VBIMycSp106721_0931.

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciMSP164756:GHQ8-914-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MCSImported.

Entry informationi

Entry nameiQ1BDL0_MYCSS
AccessioniPrimary (citable) accession number: Q1BDL0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: April 1, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.