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Q1BDL0 (Q1BDL0_MYCSS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mmcs_0908 EMBL ABG07024.1
OrganismMycobacterium sp. (strain MCS) [Complete proteome] [HAMAP] EMBL ABG07024.1
Taxonomic identifier164756 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
Q1BDL0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 7DC5CC5673359867

FASTA52656,313
        10         20         30         40         50         60 
MTTAHNQVVT SRPQAAGLPT RAEVLAALSV AIDLGLGQPA EHMLRSALIA TRLADRLGLT 

        70         80         90        100        110        120 
RAQRDCVYYA TLIMWIGCHA DSHEYARWFG DDIAVRRASY LVDWSGLPYQ RFLLANIAHG 

       130        140        150        160        170        180 
EPLLQRLRTA TALYADARGN ISRLIHSHCA SAAMLAERIG LDDDVRRALG FTFERFDGGG 

       190        200        210        220        230        240 
LPEGASGDAI PIEMRVAQFA DLLEVHHRGY GVEGAVAMAR NRRGGQFDPA VVDAFVTDPD 

       250        260        270        280        290        300 
ALLSTPTAVW TTALQQAPDR HTRLDASGLD ALLIALGDFV DLKCPFTAGH SRAVAALAAD 

       310        320        330        340        350        360 
AATALGLDGE AVALTRRAGH VHDIGRIGVS NQVWSKGSAL STAEFERVRL HPYLTERILR 

       370        380        390        400        410        420 
QVPGLAQVAA VASNHHERLD GTGYPRGLSA RELTMPDRVL AAAVAFQAAC EPRPYRAQMT 

       430        440        450        460        470        480 
AGDAARRVQR RVRDGGLDPA AAEALLQAAG QPAGPGPRQG ALTAREAEVL CLVAQGATNK 

       490        500        510        520 
EIAARLVISE KTARNHVERT YAKIGVSNRV AASLYALEHG LLGRLV 

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References

[1]"Complete sequence of chromosome of Mycobacterium sp. MCS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. expand/collapse author list , Miller C.D., Hughes J.E., Anderson A.J., Sims R.C., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCS EMBL ABG07024.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000384 Genomic DNA. Translation: ABG07024.1.
RefSeqYP_638080.1. NC_008146.1.

3D structure databases

ProteinModelPortalQ1BDL0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING164756.Mmcs_0908.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG07024; ABG07024; Mmcs_0908.
GeneID4109749.
KEGGmmc:Mmcs_0908.
PATRIC18111939. VBIMycSp106721_0931.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2771.
HOGENOMHOG000268981.
OMATRCQRGA.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK688397.

Enzyme and pathway databases

BioCycMSP164756:GHQ8-914-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1BDL0_MYCSS
AccessionPrimary (citable) accession number: Q1BDL0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)