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Q1B3S7 (Q1B3S7_MYCSS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mmcs_4352 EMBL ABG10457.1
OrganismMycobacterium sp. (strain MCS) [Complete proteome] [HAMAP] EMBL ABG10457.1
Taxonomic identifier164756 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length758 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1B3S7 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: D6A3F480B86EE82C

FASTA75884,908
        10         20         30         40         50         60 
MVDHFGRVRL TNPDKVLYPA TGTTKAEVFE YYVDVAEAMV PHIAGRAVTR KRWPNGVGEL 

        70         80         90        100        110        120 
EFFEKQLASS APDWLARGTI VHKSGTTTYP IIDTREGLAW IAQQAALEVH VPQWRFVGSG 

       130        140        150        160        170        180 
GDLTPGPATR IVFDLDPGEG VTFRQLCEVA HEVRDLITDI GLTAYPLTSG SKGLHLYVPL 

       190        200        210        220        230        240 
KEPISSQGAS VLAKRVAQQL EKAMPKQVTA TMTKSLREGK VFLDWSQNNG NKTTIAPYSL 

       250        260        270        280        290        300 
RGREHPTVAA PRTWEEIEDP DLRHLRFDEV LERIEEFGDL LADLDEYVPV EDRLTKYRSM 

       310        320        330        340        350        360 
RDPSRTPEPV PPLPPKAGNN DRFVIQEHHA RRLHYDLRLE RDGVLVSWAV PKNLPDRPSE 

       370        380        390        400        410        420 
NHLAVHTEDH PMEYLTFHGT IPKGEYGGGD MIVWDTGTYE TEKFNDHAPD GPAKGGEVII 

       430        440        450        460        470        480 
TLHGNRIDGR YALIQTDGKN WLAHRMKDQG NPTFEDFAPM LATHGSVEKF TAKQWAFEGK 

       490        500        510        520        530        540 
WDGYRLLVDA DHGKLCLKSR SGRDVTAEYP QLRALAADLA DHHVVLDGEV VALDDKGVPS 

       550        560        570        580        590        600 
FGHMQNRARS TRVEFWAFDI LRLDGRWLLK AKYRDRRKLL ETLASGGGLI VQPLLDGDGL 

       610        620        630        640        650        660 
EALEDARKRR WEGVVAKKWD STYQPGRRSS AWIKDKLWNT QEVVIGGWRE GNGGRSSGIG 

       670        680        690        700        710        720 
ALVLGIPGPD GLQFVGRVGT GFTEKELGSL KKTLAPLHTY ESPFATRLPT QDAKGVTFVR 

       730        740        750 
PELVGEVRYS ERTGDGRLRQ PSWRGLRPDK TPDDVVWE 

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium sp. MCS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. expand/collapse author list , Miller C.D., Hughes J.E., Anderson A.J., Sims R.C., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCS EMBL ABG10457.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000384 Genomic DNA. Translation: ABG10457.1.
RefSeqYP_641513.1. NC_008146.1.

3D structure databases

ProteinModelPortalQ1B3S7.
SMRQ1B3S7. Positions 7-285, 454-758.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING164756.Mmcs_4352.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG10457; ABG10457; Mmcs_4352.
GeneID4113182.
KEGGmmc:Mmcs_4352.
PATRIC18119061. VBIMycSp106721_4457.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycMSP164756:GHQ8-4397-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1B3S7_MYCSS
AccessionPrimary (citable) accession number: Q1B3S7
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)