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Q1B264 (Q1B264_MYCSS) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mmcs_4916 EMBL ABG11020.1
OrganismMycobacterium sp. (strain MCS) [Complete proteome] [HAMAP] EMBL ABG11020.1
Taxonomic identifier164756 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1B264 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 76DAC3850601BAF4

FASTA35339,822
        10         20         30         40         50         60 
MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV VLMSRSGKDL 

        70         80         90        100        110        120 
ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE SLSQRIHPAE SRVRKLSEET 

       130        140        150        160        170        180 
PAHFIGFDAL ASGDTSLMKE PFRARRQALI EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG 

       190        200        210        220        230        240 
AGLDGVIAKR LDGSYLPGKR EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD 

       250        260        270        280        290        300 
LQMVGGAASF TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY 

       310        320        330        340        350 
DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET QDG 

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium sp. MCS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. expand/collapse author list , Miller C.D., Hughes J.E., Anderson A.J., Sims R.C., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCS EMBL ABG11020.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000384 Genomic DNA. Translation: ABG11020.1.
RefSeqYP_642076.1. NC_008146.1.

3D structure databases

ProteinModelPortalQ1B264.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING164756.Mmcs_4916.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG11020; ABG11020; Mmcs_4916.
GeneID4113745.
KEGGmmc:Mmcs_4916.
PATRIC18120226. VBIMycSp106721_5030.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAYRPHKSQ.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycMSP164756:GHQ8-4971-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1B264_MYCSS
AccessionPrimary (citable) accession number: Q1B264
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: November 13, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)