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Q1AZV1 (Q1AZV1_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL ABG03077.1
EC=4.2.1.52 EMBL ABG03077.1
Gene names
Ordered Locus Names:Rxyl_0097
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subunit structure

Homotetramer By similarity. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Sequences

Sequence LengthMass (Da)Tools
Q1AZV1 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 144CF78149AB755F

FASTA29732,075
        10         20         30         40         50         60 
MFSGTLTALI TPFRNGEVDV EALEGLVEFQ IQQGVSGLVP CGTTGETPCL SEEEDRLVVE 

        70         80         90        100        110        120 
TVVRVAGGRV PVIAGTGSNS TDMAIRYTRM AEEAGADGSL QVAPYYNKPT QEGLYRHFAT 

       130        140        150        160        170        180 
IAENTSLPII LYNIPSRTGV TISAETTARL AEIPNIVGTK EATHSMDLAS DLRRLCGEEF 

       190        200        210        220        230        240 
CILSGDDSLT LPIMALGGRG VISVASNVAP AAVSQLTQAL LEGDYERGRE LHYELLPLFR 

       250        260        270        280        290 
ALFIETNPIP VKTAASLLGL CSDEMRLPMQ PMRGENLRRL QEVMEEKGHL LPTPEEV

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References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000386 Genomic DNA. Translation: ABG03077.1.
RefSeqYP_642889.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AZV1.
SMRQ1AZV1. Positions 1-289.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1AZV1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4117668.
GenomeReviewsGene locus Rxyl_0097 in contig CP000386_GR.
KEGGrxy:Rxyl_0097.
NMPDRfig|266117.6.peg.90.
PATRIC23366974. VBIRubXyl52678_0101.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0329.
HOGENOMHBG358848.
OMAFMLCGGH.
PhylomeDBQ1AZV1.
ProtClustDBPRK03170.

Enzyme and pathway databases

BioCycRXYL266117:RXYL_0097-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1AZV1_RUBXD
AccessionPrimary (citable) accession number: Q1AZV1
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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