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Q1AZF0 (Q1AZF0_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.4.1.25 EMBL ABG03228.1
Gene names
Ordered Locus Names:Rxyl_0251
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteriaActinobacteriaRubrobacteridaeRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1AZF0 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 72DC95B23FBEE304

FASTA48354,464
        10         20         30         40         50         60 
MRLERSAGIL LHPTSLPGPR PSGELGPEAL RFARFLQGAG QRLWQVLPLN PTDEGGSPYS 

        70         80         90        100        110        120 
SYSAFAGNPL LVSAEWLAED GLIEGAPREA PAPRVDYRRA LAAKGRLLRE AYSRWRPDEG 

       130        140        150        160        170        180 
FERFREERSF WLEDYALFMA LRGRLRRPWN RWPAGLATRE PGALRSARRE LAEEAGFHRF 

       190        200        210        220        230        240 
TQYRFFRDWS RVRRAAPGVR IIGDLPIFVS HDSADVWAHR DLFLLDERGE PAAVAGVPPD 

       250        260        270        280        290        300 
YFSETGQLWG NPLYDWERMR REGYRWWVER ARAALALCDA LRLDHFRGFA AFWAVPAGER 

       310        320        330        340        350        360 
TAAGGRWVEG PGEGLFRVLS KELGGLPFIA EDLGEITPDV VRLRERLGLP GMKVLQFAFG 

       370        380        390        400        410        420 
SGPENPFLPH NWRQESWVVY TGTHDNDTTA GWWLSAADGE RAFARRYLGR EYAGVWDFIR 

       430        440        450        460        470        480 
LAYASAAGWA VIPMQDVLGL GTEARMNTPG TGEGNWEWRL GGEALTPNLA ARLGELARTY 


GRA 

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References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000386 Genomic DNA. Translation: ABG03228.1.
RefSeqYP_643040.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AZF0.
SMRQ1AZF0. Positions 1-483.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1AZF0.

Protein family/group databases

CAZyGH77. Glycoside Hydrolase Family 77.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4116082.
GenomeReviewsGene locus Rxyl_0251 in contig CP000386_GR.
KEGGrxy:Rxyl_0251.
NMPDRfig|266117.6.peg.230.
PATRIC23367292. VBIRubXyl52678_0260.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1640.
HOGENOMHBG704085.
OMAWGNPLYN.

Enzyme and pathway databases

BioCycRXYL266117:RXYL_0251-MONOMER.

Family and domain databases

InterProIPR003385. Glyco_hydro_77.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK00705.
PfamPF02446. Glyco_hydro_77. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR00217. MalQ. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1AZF0_RUBXD
AccessionPrimary (citable) accession number: Q1AZF0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)