Q1AYR2 (Q1AYR2_RUBXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) EMBL ABG03466.1

Gene names

Ordered Locus Names:

Rxyl_0492

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP] EMBL ABG03466.1

Taxonomic identifier

266117 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter › Rubrobacter xylanophilus

Protein attributes

Sequence length	754 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro signal transduction by phosphorylation Inferred from electronic annotation. Source: GOC
Molecular_function	phosphorelay sensor kinase activity Inferred from electronic annotation. Source: InterPro phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1AYR2 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 9954321AF37CA66C	FASTA	754	84,478
	10 20 30 40 50 60 MRSACEENGA TGQKGPEPDD LRLLQFLRWV VPLVFGFAAL AGAAAALFSD PGLLAAGVIL 70 80 90 100 110 120 LTYGGLLLFA RRRVGAGERV EAVWTICVGL LLAALLMSAV QPGWLAVLAV TPLISVAVAL 130 140 150 160 170 180 PYVRGGDLLR LIFLAWLTVV VMAILSRALP PLSRPPAWFV DAFTAGALAA ATAVVLLLLW 190 200 210 220 230 240 QFSTRLNETL ARTRAAEERY ALAERGVNDG LWDWDLRRDR VYYSSRWKEM LGWREDEVGE 250 260 270 280 290 300 EPDEWFRRVH PQDRKRLLEE VREHLRGRRE HLNVEYRIRH RDGSYRWMLT RGLAVRDGEG 310 320 330 340 350 360 NPVRMAGSQT DITRRKQAEE KLLHEASHDA LTGLPNRAFF MERLGEALRR PGDGDRVAVL 370 380 390 400 410 420 FIDLDRFKMI NDSLGHAMGD RLLVAAAERL KGCLRPQDTL ARLGGDEFTV LLEGVSSEEA 430 440 450 460 470 480 ASVADRLLER LREPFRLDGY ELFTAASVGV VLGGRERAGP EELLRDADIA MYRAKALGGG 490 500 510 520 530 540 RKGIFEAGMH TRAMELFRLE NELRRAIERE EFTAHYQPIV SLKTGLISGF EALVRWRHPE 550 560 570 580 590 600 RGLIRPDEFV PVAEETGLIV PLELSVVREA CASLVSWQRE FPQHRPLTMS VNLSRNQLAR 610 620 630 640 650 660 PELPEQVERI LLETGLDARS LRLEVTESAI MENVGSAAAT LSRLRDMNIR VHIDDFGMGY 670 680 690 700 710 720 SSLSVLHQLP IDALKVDRSF VGRMDGANDD VEIVQTIITL AHNLGLDVVA EGVEREEHLD 730 740 750 RLRRLGCDYA QGFLFSEPLD AAGARRLLSA YRRW

References

[1]

"Complete sequence of Rubrobacter xylanophilus DSM 9941." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000386 Genomic DNA. Translation: ABG03466.1.
RefSeq	YP_643278.1. NC_008148.1.
3D structure databases
ProteinModelPortal	Q1AYR2.
ModBase	Search...
Protein-protein interaction databases
STRING	266117.Rxyl_0492.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG03466; ABG03466; Rxyl_0492.
GeneID	4114677.
KEGG	rxy:Rxyl_0492.
PATRIC	23367798. VBIRubXyl52678_0512.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2202.
HOGENOM	HOG000136246.
OMA	HAKMEGR.
Enzyme and pathway databases
BioCyc	RXYL266117:GH8O-497-MONOMER.
Family and domain databases
Gene3D	3.20.20.450. 1 hit.
InterPro	IPR001054. A/G_cyclase. IPR001633. Diguanylate_PEstase_EAL_dom. IPR000160. GGDEF_dom. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013655. PAS_fold_3. [Graphical view]
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF08447. PAS_3. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit. SSF55785. SSF55785. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. sensory_box. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1AYR2_RUBXD

Accession

Primary (citable) accession number: Q1AYR2

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 29, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)