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Q1AYP5 (Q1AYP5_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0133 protein Rxyl_0509 HAMAP MF_00274
Gene names
Ordered Locus Names:Rxyl_0509
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length110 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family. HAMAP MF_00274

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q1AYP5 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 6CAA6C8D02EC1617

FASTA11011,609
        10         20         30         40         50         60 
MAGRRNINKM MKQVQQMQQE MQRAQEELAR ETVTASAGGG AVKVTMTGGL ELTSIEIDPG 

        70         80         90        100        110 
VLDPEDVEML QDMVQAAVNE AINSAQELAS RKLGGVTGGL GDLGLNLPGL

« Hide

References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000386 Genomic DNA. Translation: ABG03483.1.
RefSeqYP_643295.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AYP5.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1AYP5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4116768.
GenomeReviewsGene locus Rxyl_0509 in contig CP000386_GR.
KEGGrxy:Rxyl_0509.
NMPDRfig|266117.6.peg.469.
PATRIC23367832. VBIRubXyl52678_0529.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0718.
HOGENOMHBG734215.
OMAMADFLGM.

Enzyme and pathway databases

BioCycRXYL266117:RXYL_0509-MONOMER.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1AYP5_RUBXD
AccessionPrimary (citable) accession number: Q1AYP5
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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