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Q1AY98 (Q1AY98_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Peptide methionine sulfoxide reductase MsrB HAMAP MF_01400
EC=1.8.4.12 HAMAP MF_01400
Alternative name(s):
Peptide-methionine (R)-S-oxide reductase HAMAP MF_01400
Gene names
Name:msrB HAMAP MF_01400
Ordered Locus Names:Rxyl_0660
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length138 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (R)-S-oxide + thioredoxin. HAMAP MF_01400

Cofactor

Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein By similarity. HAMAP MF_01400

Sequence similarities

Belongs to the MsrB Met sulfoxide reductase family. HAMAP MF_01400

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1231Nucleophile By similarity HAMAP MF_01400
Metal binding511Zinc By similarity HAMAP MF_01400
Metal binding541Zinc By similarity HAMAP MF_01400
Metal binding1001Zinc By similarity HAMAP MF_01400
Metal binding1031Zinc By similarity HAMAP MF_01400

Sequences

Sequence LengthMass (Da)Tools
Q1AY98 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: CD816053C222931E

FASTA13815,631
        10         20         30         40         50         60 
MAQTPRKVQL SDEEWRRRLS PEEYRVAREG GTEPAFTGRY WDHKEEGVYR CVCCGTPLFS 

        70         80         90        100        110        120 
SETKYDSGTG WPSFWAPIEE ANVAYREDRS LLMRRTEVLC AACDAHLGHV FDDGPPPTGR 

       130 
RYCMNSAALR FSPGPPPG

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References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000386 Genomic DNA. Translation: ABG03630.1.
RefSeqYP_643442.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AY98.
SMRQ1AY98. Positions 8-135.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1AY98.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4114646.
GenomeReviewsGene locus Rxyl_0660 in contig CP000386_GR.
KEGGrxy:Rxyl_0660.
NMPDRfig|266117.6.peg.594.
PATRIC23368112. VBIRubXyl52678_0669.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0229.
HOGENOMHBG715255.
OMAAPLFRSD.
PhylomeDBQ1AY98.

Enzyme and pathway databases

BioCycRXYL266117:RXYL_0660-MONOMER.

Family and domain databases

HAMAPMF_01400. MsrB.
[Tree]
InterProIPR002579. Methionine_sulphoxide_MsrB.
IPR011057. Mss4-like.
[Graphical view]
Gene3DG3DSA:2.170.150.20. MsrB. 1 hit.
KOK07305.
PfamPF01641. SelR. 1 hit.
[Graphical view]
SUPFAMSSF51316. Mss4_like. 1 hit.
TIGRFAMsTIGR00357. TIGR00357. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1AY98_RUBXD
AccessionPrimary (citable) accession number: Q1AY98
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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