Q1AXU8 (Q1AXU8_RUBXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445

Gene names

Name:	gcp HAMAP MF_01445
Ordered Locus Names:	Rxyl_0812

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]

Taxonomic identifier

266117 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length	329 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm By similarity HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_01445
Cellular component	Cytoplasm HAMAP MF_01445
Molecular function	Hydrolase EMBL ABG03780.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro threonylcarbamoyladenosine biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1AXU8 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 749A7AE7BD37E988	FASTA	329	34,609
	10 20 30 40 50 60 MILAIETSCD DTCAAVVEPD GRRALSNAVH TQTEHARYGG VVPEVASRAH LERMDGVVRK 70 80 90 100 110 120 ALSDAGVSLD QIDRVAVTVR PGLIGALLVG VAAAKGVAYA RRLPLVPVNH LEGHVAAAYL 130 140 150 160 170 180 EAPDLEPPFV ALVASGGHTA LYAVGEDRGM RLLGETLDDA AGEALDKGAR MLGLGFPGGP 190 200 210 220 230 240 AISRAAAGGD PERYGFPVAL KGRDNLDFSF SGLKTSLLYR IRELGPERVR RELPHLAASY 250 260 270 280 290 300 EAAVVEALAR KLLRAAELRE AGAVVVAGGV AANGRLRERL RRECAGRGLR LVIPHPSLCT 310 320 DNAAMIGAAA AHTPKIPWPE YLSLNARSV

References

[1]

"Complete sequence of Rubrobacter xylanophilus DSM 9941." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000386 Genomic DNA. Translation: ABG03780.1.
RefSeq	YP_643592.1. NC_008148.1.
3D structure databases
ProteinModelPortal	Q1AXU8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1AXU8.
Protein family/group databases
MEROPS	M22.A01.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4116188.
GenomeReviews	Gene locus Rxyl_0812 in contig CP000386_GR.
KEGG	rxy:Rxyl_0812.
NMPDR	fig|266117.6.peg.738.
PATRIC	23368432. VBIRubXyl52678_0829.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0533.
HOGENOM	HBG304663.
OMA	PAVGVHH.
ProtClustDB	CLSK2778506.
Enzyme and pathway databases
BioCyc	RXYL266117:RXYL_0812-MONOMER.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1AXU8_RUBXD

Accession

Primary (citable) accession number: Q1AXU8

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)