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Q1AX94 (Q1AX94_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rxyl_1018 EMBL ABG03984.1
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP] EMBL ABG03984.1
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteriaActinobacteriaRubrobacteridaeRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter

Protein attributes

Sequence length652 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4141 Potential EMBL ABG03984.1
Chain42 – 652611 Potential EMBL ABG03984.1
PRO_5000124723

Sequences

Sequence LengthMass (Da)Tools
Q1AX94 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: A03D99987DC785A6

FASTA65268,220
        10         20         30         40         50         60 
MRSGSVPGEP LTTGLLRAVA GAALFALLAA GLGEGAAAYA GAALLAGFGL LWASGRPRRL 

        70         80         90        100        110        120 
LGEPLVPLLA DACAVSLLVL GTGGPGSPLL PLYFLAALGL VRAGETWRQV AGGGALVGGF 

       130        140        150        160        170        180 
LAAAWPVPAP ALLGAGMLAA FCCGAAALGR ELRGLSGRGR ELAARAAEER ELAGRLAALG 

       190        200        210        220        230        240 
ERLGPVLGML EPERVLEWAA GTARDLCGAA YAHAVLLDGN VHRTSMGGDF PACPTWWHPA 

       250        260        270        280        290        300 
VQELVLRGAR GGETVRRPGL EVHGLEGFIA VPVEAPGGGA LVVGGGRFGE VEERLLRALA 

       310        320        330        340        350        360 
GQLCAALQDG GGAPGGRDAV TGLPNRASLH RVLRKELAYG GAAGVVSLRL GGLEDYARSQ 

       370        380        390        400        410        420 
GMALSEALVR RIAGRLAGRH RAFRYGVDEF CLLVRGADED RARGVARWAL DVVREVAGDL 

       430        440        450        460        470        480 
EASAGYAVSS GGARGPEELL ALARRPLPEG GGEARRGLEV EVREVVEALH EAASVRDPEL 

       490        500        510        520        530        540 
GEHMREVSRI ARRVGERLGL SPQELEALTY GALLHDIGKL GVPDAILNKP SALSPREYEA 

       550        560        570        580        590        600 
VKRHTEHGAR ILRRVRALSE AMLAVRHHHE RFDGAGYPDG LQGADIPLLA RIVFVADAFD 

       610        620        630        640        650 
SMTRSRPYRG GASRREALRE IAHNSGSQFD PRVVDALFEV MEELGRRRSA SA 

« Hide

References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000386 Genomic DNA. Translation: ABG03984.1.
RefSeqYP_643796.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AX94.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266117.Rxyl_1018.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG03984; ABG03984; Rxyl_1018.
GeneID4116704.
KEGGrxy:Rxyl_1018.
PATRIC23368882. VBIRubXyl52678_1046.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2206.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK755270.

Enzyme and pathway databases

BioCycRXYL266117:GH8O-1035-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR000160. GGDEF_dom.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamPF00990. GGDEF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
TIGRFAMsTIGR00277. HDIG. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1AX94_RUBXD
AccessionPrimary (citable) accession number: Q1AX94
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: November 13, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)