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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Rxyl_1690

Organism
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-1724-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Rxyl_1690Imported
OrganismiRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)Imported
Taxonomic identifieri266117 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteridaeRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter
ProteomesiUP000006637 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266117.Rxyl_1690.

Structurei

3D structure databases

ProteinModelPortaliQ1AVC8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
OMAiFAVENDG.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR000014. PAS.
IPR013656. PAS_4.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1AVC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGRAADPA LAARVLEHIS DVFLILDERG RVAYLNPAGE EALGVSREAV
60 70 80 90 100
GRRLEEILPE AASGRVAEAL ERAARERGSV SFELNSRTLG GWFAGRVYPF
110 120 130 140 150
PGGLALLLWD ISERKEEQER YQRLYREKHR IARVLQEALL PPRLPEVPGI
160 170 180 190 200
EVGGRYLAAA EGMEVGGDFY DVFAVENDGW ALAIGDVTGK GPEAASLTSL
210 220 230 240 250
ARYTIRTAAM RVKRPRGVLS FLNREILRQT EGDRFFTVVY CELEPYRAGE
260 270 280 290 300
GAVEIRVGCA GHPPPMVLRR GGEVETLPST GMILGAVEEP EVATWSGRLS
310 320 330 340 350
EGEAMVLYTD GVTEARGPGG ELFGEERLRE LVGGCAGAAA EEVARRIEQA
360 370
VLDFQRGEVR DDVAVLVARV QDASGEV
Length:377
Mass (Da):40,942
Last modified:July 10, 2006 - v1
Checksum:i3EEE7B89759AA9DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG04650.1.
RefSeqiYP_644462.1. NC_008148.1.

Genome annotation databases

EnsemblBacteriaiABG04650; ABG04650; Rxyl_1690.
KEGGirxy:Rxyl_1690.
PATRICi23370260. VBIRubXyl52678_1721.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG04650.1.
RefSeqiYP_644462.1. NC_008148.1.

3D structure databases

ProteinModelPortaliQ1AVC8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266117.Rxyl_1690.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG04650; ABG04650; Rxyl_1690.
KEGGirxy:Rxyl_1690.
PATRICi23370260. VBIRubXyl52678_1721.

Phylogenomic databases

eggNOGiCOG2208.
OMAiFAVENDG.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-1724-MONOMER.

Family and domain databases

InterProiIPR000014. PAS.
IPR013656. PAS_4.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 9941 / NBRC 16129Imported.

Entry informationi

Entry nameiQ1AVC8_RUBXD
AccessioniPrimary (citable) accession number: Q1AVC8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2006
Last sequence update: July 10, 2006
Last modified: March 31, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.