Glycosyl transferase, family 2 - Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)

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Q1ATN7 (Q1ATN7_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Glycosyl transferase, family 2 EMBL ABG05241.1

Gene names

Ordered Locus Names:

Rxyl_2312

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Magnesium PDB 3F1Y Metal-binding PDB 3F1Y
Molecular function	Transferase EMBL ABG05241.1
Technical term	3D-structure PDB 3F1Y Complete proteome
Gene Ontology (GO)
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

1

Magnesium; via carbonyl oxygen PDB 3F1Y

Metal binding

1

Magnesium; via carbonyl oxygen PDB 3F1Y

Sequences

Sequence

Length

Mass (Da)

Tools

Q1ATN7 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 03002D7AD2856F47
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335

37,448

        10         20         30         40         50         60 
MSTYHERPLG PTSAADWFRQ RSYEYGQFPP ERLARRKREL GLAVSAVLPS RNVAETVGGI 

        70         80         90        100        110        120 
IDEIHALNER APLIDQVLVV DADSEDGTAG IAASRGAEVY SENELMSGYG DAHGKGDAMW 

       130        140        150        160        170        180 
RALSVARGDL VLYVDADTRD FRPQLAYGVL GPILEVPEVR FVKAAYRRPF RKGESIEEDG 

       190        200        210        220        230        240 
GGRVTELTAK PLFNLFYPEL TGFVQPLAGE FVADRELFCS IPFLTGYAVE TGIMIDVLKK 

       250        260        270        280        290        300 
VGLGAMAQVD LGERQNRHQH LRDLSRMSYA VVRAVARRLR QEGRLQQVRE PGLPESFFQF 

       310        320        330 
SDYLHAVATP EGLKLQEYVE ELVERPPINE VLRVR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Rubrobacter xylanophilus DSM 9941." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.
[2]	"Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity." Empadinhas N., Pereira P.J., Albuquerque L., Costa J., Sa-Moura B., Marques A.T., Macedo-Ribeiro S., da Costa M.S. Mol. Microbiol. 79:76-93(2011) [PubMed: 21166895] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000386 Genomic DNA. Translation: ABG05241.1.

RefSeq

YP_645053.1. NC_008148.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3F1Y	X-ray	2.20	A/C	1-335	[»]

ModBase

Protein-protein interaction databases

STRING

Protein family/group databases

CAZy

GT81. Glycosyltransferase Family 81.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

GeneID

GenomeReviews

Gene locus Rxyl_2312 in contig CP000386_GR.

KEGG

NMPDR

fig|266117.6.peg.2022.

PATRIC

23371432. VBIRubXyl52678_2293.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

RXYL266117:RXYL_2312-MONOMER.

Family and domain databases

InterPro

IPR001173. Glyco_trans_2.
[Graphical view]

Pfam

PF00535. Glycos_transf_2. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q1ATN7_RUBXD

Accession

Primary (citable) accession number: Q1ATN7

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info