Q1ATE8 (Q1ATE8_RUBXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase PrpD EMBL ABG05330.1
EC=4.2.1.79 EMBL ABG05330.1

Gene names

Ordered Locus Names:

Rxyl_2402

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]

Taxonomic identifier

266117 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length	470 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABG05330.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1ATE8 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: B1C742C062964F65	FASTA	470	51,881
	10 20 30 40 50 60 MADRVIERIS EYVCTYEPQS PLARETARYC LMDSIGCALL ALRYPECAKL LGPAVPGTVV 70 80 90 100 110 120 PHGSRVPGTP YELDPVKAAF DIGSAIRWLD YNDTWLAAEW GHPSDNLGAI LAVSDHLSRS 130 140 150 160 170 180 RRARGEEPLY VRDVLSAAIE AHEIQGVLAL ENAFNRVGLD HVLLVRVASA AVATRLLGGG 190 200 210 220 230 240 REEVESAVSG AFIDGGPLRT YRHAPNVGSR KSWAAGDATS RGVRLAMMAV SGEMSYPKAL 250 260 270 280 290 300 SAEGWGFQDA LFGGKEIELA RPFGSYVMEN VLFKISFPAE FHAQTAAEAA LRLHPEVRDR 310 320 330 340 350 360 LGEIERVEIT TQEPAMRIIA KEGPLNNPAD RDHCIQYITA VGLIFGEITA DSYEDSFAKD 370 380 390 400 410 420 PRIDELRAKT TVAEDERYSR DYLDPDKRSI ANAVQVFFRD GSSTEKVEVE YPIGHRRRRE 430 440 450 460 470 EGIPLLEEKF RANAATRLPK KKLSALKELF SEQGRLEETP VDELMGLLAM

References

[1]

"Complete sequence of Rubrobacter xylanophilus DSM 9941." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000386 Genomic DNA. Translation: ABG05330.1.
RefSeq	YP_645142.1. NC_008148.1.
3D structure databases
ProteinModelPortal	Q1ATE8.
SMR	Q1ATE8. Positions 3-467.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1ATE8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4115361.
GenomeReviews	Gene locus Rxyl_2402 in contig CP000386_GR.
KEGG	rxy:Rxyl_2402.
PATRIC	23371616. VBIRubXyl52678_2385.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2079.
HOGENOM	HBG298383.
OMA	CLMDTLG.
PhylomeDB	Q1ATE8.
ProtClustDB	PRK09425.
Enzyme and pathway databases
BioCyc	RXYL266117:RXYL_2402-MONOMER.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1ATE8_RUBXD

Accession

Primary (citable) accession number: Q1ATE8

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)