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Protein

Formate--tetrahydrofolate ligase 3

Gene

fhs3

Organism
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate.UniRule annotation

Pathway:itetrahydrofolate interconversion

This protein is involved in the pathway tetrahydrofolate interconversion, which is part of One-carbon metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway tetrahydrofolate interconversion and in One-carbon metabolism.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi66 – 738ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

One-carbon metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-2574-MONOMER.
UniPathwayiUPA00193.

Names & Taxonomyi

Protein namesi
Recommended name:
Formate--tetrahydrofolate ligase 3UniRule annotation (EC:6.3.4.3UniRule annotation)
Alternative name(s):
Formyltetrahydrofolate synthetase 3UniRule annotation
Short name:
FHS 3UniRule annotation
Short name:
FTHFS 3UniRule annotation
Gene namesi
Name:fhs3UniRule annotation
Ordered Locus Names:Rxyl_2519
OrganismiRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Taxonomic identifieri266117 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteriaRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter
ProteomesiUP000006637 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 573573Formate--tetrahydrofolate ligase 3PRO_0000293056Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi266117.Rxyl_2519.

Structurei

3D structure databases

ProteinModelPortaliQ1AT39.
SMRiQ1AT39. Positions 4-571.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the formate--tetrahydrofolate ligase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000040280.
KOiK01938.
OrthoDBiEOG6PCPSP.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
HAMAPiMF_01543. FTHFS.
InterProiIPR000559. Formate_THF_ligase.
IPR020628. Formate_THF_ligase_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF01268. FTHFS. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00721. FTHFS_1. 1 hit.
PS00722. FTHFS_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1AT39-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTNLEIARG AKLLPIEEVG RSMGLREERH LEPYGRHVAK VDLCAIEDLS
60 70 80 90 100
ERPKAKYILV SAITPTPLGE GKTTTTVGLG QAFSHIGKRA TIAIRQASMG
110 120 130 140 150
PAFGIKGGAA GGGYSQVVPM ERLNLHLTGD LHAVTEAHNM LAAMIDNHLY
160 170 180 190 200
HGNGLGIEPH SISWRRVMDV NDRSLRNIVI GLGARTDGVP RQSGFDITAA
210 220 230 240 250
SEVMAILALA SSLEDLRERL GRIVIGHNRE GNPVSAEDVR GAGAMAVILK
260 270 280 290 300
EAIKPNLMQT LEGTPALVHA GPFGNIATGN SSVVADLIGI RTADYLITEA
310 320 330 340 350
GFGADMGAER FFNIKCRISG LEPDAAVVVA TVRALKAHSG RYQIKAGAPL
360 370 380 390 400
PEELLEENPQ DVLAGAENLK KQIENIKLHG VPAVVAINAF PTDHPSEHKA
410 420 430 440 450
IEEAAKEVGA RCAVCRHFTE GGKGAVELAR ALEETIEENE RERRRGGGGS
460 470 480 490 500
FRFLYPLEMP LKQKIETIAR EVYGAEGVEY DAEALRALEG FERAGFGRLP
510 520 530 540 550
VCLAKTHLSL SSDPALKGAP RGWKLSVREV RASVGAGFIY PICGQMRTMP
560 570
GLSAHPAAER IDLDGEGNVV GLF
Length:573
Mass (Da):61,311
Last modified:July 11, 2006 - v1
Checksum:iCDAE742660E99CAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05439.1.
RefSeqiWP_011565449.1. NC_008148.1.

Genome annotation databases

EnsemblBacteriaiABG05439; ABG05439; Rxyl_2519.
KEGGirxy:Rxyl_2519.
PATRICi23371822. VBIRubXyl52678_2486.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05439.1.
RefSeqiWP_011565449.1. NC_008148.1.

3D structure databases

ProteinModelPortaliQ1AT39.
SMRiQ1AT39. Positions 4-571.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266117.Rxyl_2519.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG05439; ABG05439; Rxyl_2519.
KEGGirxy:Rxyl_2519.
PATRICi23371822. VBIRubXyl52678_2486.

Phylogenomic databases

HOGENOMiHOG000040280.
KOiK01938.
OrthoDBiEOG6PCPSP.

Enzyme and pathway databases

UniPathwayiUPA00193.
BioCyciRXYL266117:GH8O-2574-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
HAMAPiMF_01543. FTHFS.
InterProiIPR000559. Formate_THF_ligase.
IPR020628. Formate_THF_ligase_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF01268. FTHFS. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00721. FTHFS_1. 1 hit.
PS00722. FTHFS_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 9941 / NBRC 16129.

Entry informationi

Entry nameiFTHS3_RUBXD
AccessioniPrimary (citable) accession number: Q1AT39
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 11, 2006
Last modified: July 22, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.